RNA id: AMCG00020929


Basic Information

Item Value
RNA id AMCG00020929
length 1401
RNA type mRNA
GC content 0.56
exon number 1
gene id AMCG00020929
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 37173840 ~ 37175240 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGACCAATGAAACCTTGCTCTCAGAGACTGCTGGCAGCAAGATCCAAGGGATTTTAACTCAATCGCTGACCGCCTGCCTGCTCTTCCTGTTCATCTTCAGCACTCTGCTGGGCAACACTCTGGTGTGCGCCGCCGTCGTGAAATTCCGCCACCTCCGTTCCAAGGTCACCTATGTCTTTGTGGTCTCTCTGGCCGTCTCCGATCTCTTTGTGGCCACCTTGGTCATGCCTTGGCGGGCTGTGGCCGAGGTGGCAGGGTTCTGGCCGTTTGGCAGCTTCTGCAACATCTGGGTGGCTTTCGACATCATGTGCTCCACAGCTTCCATTCTCAACTTGTGCATCATCAGCGTGGACCGCTACTGGGCCATCGCAAGCCCTTTCCGCTACGAGCGCAAGATGACCCGTCGGGCAGCATTGGTCATGATTGGTGTGGCCTGGACCCTCTCAGTTCTCATCTCTTTCATCCCAGTGCAACTGAGCTGGCACAAAGCCGAGGGGAGCCCCCCTGAGGTTGGATCACCTCCCCGGATCTCCTCTGAAAACTGCGACTCCAGCCTGAATCGCACCTATGCCATCACCTCCTCCCTGATCAGCTTCTACATCCCAGTGGCCATCATGATTGTCACTTACACCCGCATCTACCGCATAGCTCAGAGACAGATCCGCCGCATCTCCAGCCAGGAGAGAGCAGCTGAGCATGCCCAGAGCCGCAGGGCCGACGGATGTCTACCCGACACTGGCCTGAAGAGCACTTTCAAGAAGGAGACCAAGGTCCTCAAAACCCTCTCTATCATCATGGGGGTCTTCGTTTGCTGTTGGATGCCCTTCTTCATCCTTAACTGCATGGTTCCTTTCTGCAACCCAGGCATCCACCACGCTGAACATCTCCCTTGTGTGAGCGAGACCACCTTCGACGTTTTTGTCTGGTTCGGTTGGGCCAACTCTACCCTCAACCCCATCGTCTACGCCTTCAATGCTGATTTCCGCCGGGCCTTCGCTGCCCTGCTGGGCTGTGGGCGGCTGTGCTCCAGCAACATAGTGGAGACCGTGGACTTCAGTAATGAATTGGTGTCCTACCACCATgacaccaccaacaacaacaaggaaATCCGGACCCTCAGCTACCCCTACCTCCTTCCCCATGTCGTCAGGCAGCCAAGTGAAAAGGAGGTCTCTTTTGATGACGTGTCCCAGATCGCCCAAACCTCTTGCAGGGAGGAGTGTGGCTTCAAGCATGTGGACGGCCTGCCAGTCATCGTCCACACGGACTGCGAGACAGATGTGTCACTGGACAAGATCACTCCTTTTACCCCAGCAGAAAAACCTCCGGCAGGAGATTTCTGCACAAAGAGCCATCTGACCCACGGGCAGAGACCAAGCACTGGTTCTGCGATATTATGA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0004952 dopamine neurotransmitter receptor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU83275 lncRNA downstream 154044 37013981 ~ 37019796 (-) True G66613
TU83185 lncRNA downstream 303685 36869417 ~ 36870155 (-) True G66536
TU83184 lncRNA downstream 322204 36851070 ~ 36851636 (-) True G66535
TU83176 lncRNA downstream 426097 36747515 ~ 36747743 (-) True G66527
TU83158 lncRNA downstream 891313 36278150 ~ 36282527 (-) True AMCG00020911
TU83352 lncRNA upstream 92542 37267782 ~ 37268223 (-) True G66685
TU83423 lncRNA upstream 319883 37495123 ~ 37495370 (-) True G66740
TU83474 lncRNA upstream 561523 37736763 ~ 37739197 (-) True G66786
TU83511 lncRNA upstream 724227 37899467 ~ 37899878 (-) True G66817
TU83550 lncRNA upstream 1005797 38181037 ~ 38181274 (-) True G66851
AMCG00020927 mRNA downstream 18553 37148494 ~ 37155287 (-) True AMCG00020927
AMCG00020928 mRNA downstream 50981 37115543 ~ 37122859 (-) True AMCG00020928
AMCG00020920 mRNA downstream 99263 37069515 ~ 37074577 (-) True AMCG00020920
AMCG00020922 mRNA downstream 106035 37061595 ~ 37067805 (-) True AMCG00020922
AMCG00020923 mRNA downstream 132957 37020011 ~ 37040883 (-) True AMCG00020923
AMCG00020932 mRNA upstream 65799 37241039 ~ 37282869 (-) True AMCG00020932
AMCG00020933 mRNA upstream 128725 37303965 ~ 37323700 (-) True AMCG00020933
AMCG00020935 mRNA upstream 149974 37325214 ~ 37337254 (-) True AMCG00020935
AMCG00020934 mRNA upstream 162671 37337911 ~ 37356170 (-) True AMCG00020934
AMCG00020936 mRNA upstream 223059 37398299 ~ 37454868 (-) True AMCG00020936
TU83289 other downstream 106048 37065163 ~ 37067792 (-) False AMCG00020922
TU83279 other downstream 127901 37040447 ~ 37045939 (-) False AMCG00020923
TU83060 other downstream 1187144 35975764 ~ 35986696 (-) False AMCG00020900
TU82986 other downstream 1354010 35813969 ~ 35819830 (-) True AMCG00020887
TU82875 other downstream 1489285 35679432 ~ 35684555 (-) True G66279
TU83462 other upstream 456560 37631800 ~ 37632576 (-) True AMCG00020943
TU83728 other upstream 1874976 39050216 ~ 39104867 (-) False AMCG00020970
TU84154 other upstream 4425161 41600401 ~ 41602270 (-) False AMCG00021012

Expression Profile