RNA id: AMCG00020937


Basic Information

Item Value
RNA id AMCG00020937
length 1241
RNA type mRNA
GC content 0.50
exon number 5
gene id AMCG00020937
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 37524705 ~ 37527768 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TGGCTAGTGACGTGTCAGCTGACCGTGTTTGCGGAAGTGCATTTCGTACAAAGCGGTGGGACTGTTTCGGTCTGGAGAGACAGATATTCCTGCACTGCTGAAGACTTGCACACCTCTGCCACCCTGATCCCGGAGCATGGCATCATCACACTGTTCCTGCTGCACAGATGCCAACCTTGCATCCCCCAGTACCCATCAGACTCTGGATGAGATGGACTTTGAAAGAGgCATATGGAGTGCCGCTCTTGACGCAGACCTGGAGAGACTTCGAGCCTTCCTACGCAAGGGCACAGACCCCAACCTGAGGGACCAGGCTGGCTACACTGCACTGcACTATGCCAGTCGCACTGGCAGTGAATCTGCCTGTTCTCTGCTGCTGGACCATGGCGCGTGTGCCAACCCCCGGACCAGGGGCGGGGCCACTCCCTTGCATCGCTCTGCCTACTGCGGGCATGTGGGCGTGGTCAGACTGCTCCTGAATCGTGGGGCAGACCCTCAGTTGTGTGACGATGATGGCTCCTCCCCTCTGCACAAGGTAGGCTGCAGAGCAGGGCTGTGAGGACGTGTGTGCGCTGCTTGTCCAGCACTGCCCCTCCCTCAAGAAAGGGACAGACAAGAGGGCCCGCATCCCCCAACAGCTGGTCCAGCAGGAGGGGCATCTGAAGGAGCTCCTGAGGCCGTCTGAAAACACCCCCTGACTCCCTTTAACCCCAGCAAGAGACACCCGACACGACCATCAAGACAATCTGCTTCTTTTAACAAAGTGGGGGTCGAATCCAGTTCAGTTCCAGAGTTGCAGAGCTGGAAACAGAACTGATTGTTGCATTCAGGTGGAATTGATCCGACCCCCAGGTCAGTGAGGATTAgtatttacagtgtttttgtatCCTGCAATTGTACAATTAGTGTACAGGAACCCCATGAGCCCTGAAGTGCAGATAAACCTTCTTAGGAGATGTCGTAACATCCTTCACATTTCCTACACATGTATTCATTGCAGTTGAAAAGTATTTATGAAGGTATCAAGAATTATACGGGACTCATGATTCATGTTGAACACGTGGACTTAGAATGTCTTGGAATAGCttcagtgttattattactaatgcATTTGGCAGCTAGATTTTACCTTTGTAACTTAAAAagtattcagatattaatttTGGGGGAATAAGTCTGtaattattgctgtttttcattctttcattaaAGCACAGAAGATCATCTGTTTTTTGGAACAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU83423 lncRNA downstream 29335 37495123 ~ 37495370 (-) True G66740
TU83352 lncRNA downstream 256482 37267782 ~ 37268223 (-) True G66685
TU83275 lncRNA downstream 504909 37013981 ~ 37019796 (-) True G66613
TU83185 lncRNA downstream 654550 36869417 ~ 36870155 (-) True G66536
TU83184 lncRNA downstream 673069 36851070 ~ 36851636 (-) True G66535
TU83474 lncRNA upstream 208995 37736763 ~ 37739197 (-) True G66786
TU83511 lncRNA upstream 371699 37899467 ~ 37899878 (-) True G66817
TU83550 lncRNA upstream 653269 38181037 ~ 38181274 (-) True G66851
TU83575 lncRNA upstream 750226 38277994 ~ 38278539 (-) True G66872
TU83634 lncRNA upstream 1167224 38694992 ~ 38697487 (-) True G66920
AMCG00020936 mRNA downstream 69837 37398299 ~ 37454868 (-) True AMCG00020936
AMCG00020934 mRNA downstream 168535 37337911 ~ 37356170 (-) True AMCG00020934
AMCG00020935 mRNA downstream 187451 37325214 ~ 37337254 (-) True AMCG00020935
AMCG00020933 mRNA downstream 201005 37303965 ~ 37323700 (-) True AMCG00020933
AMCG00020932 mRNA downstream 241836 37241039 ~ 37282869 (-) True AMCG00020932
AMCG00020939 mRNA upstream 6987 37534755 ~ 37539399 (-) True AMCG00020939
AMCG00020938 mRNA upstream 17856 37545624 ~ 37549905 (-) True AMCG00020938
AMCG00020940 mRNA upstream 28812 37556580 ~ 37566120 (-) True AMCG00020940
AMCG00020943 mRNA upstream 104009 37631777 ~ 37632492 (-) False AMCG00020943
AMCG00020948 mRNA upstream 244383 37772151 ~ 37814897 (-) True AMCG00020948
TU83289 other downstream 456913 37065163 ~ 37067792 (-) False AMCG00020922
TU83279 other downstream 478766 37040447 ~ 37045939 (-) False AMCG00020923
TU83060 other downstream 1538009 35975764 ~ 35986696 (-) False AMCG00020900
TU82986 other downstream 1704875 35813969 ~ 35819830 (-) True AMCG00020887
TU82875 other downstream 1840150 35679432 ~ 35684555 (-) True G66279
TU83462 other upstream 104032 37631800 ~ 37632576 (-) True AMCG00020943
TU83728 other upstream 1522448 39050216 ~ 39104867 (-) False AMCG00020970
TU84154 other upstream 4072633 41600401 ~ 41602270 (-) False AMCG00021012

Expression Profile