RNA id: AMCG00020940



Basic Information


Item Value
RNA id AMCG00020940
length 441
RNA type mRNA
GC content 0.49
exon number 3
gene id AMCG00020940
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 37556580 ~ 37566120 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGTTCGTCTCCAGCATTCCCTTGATCTGGTAGCAGACATCGTCGGCATTAGTCTAACCTCATCGAGCAGGGAGAAGACGCTGCTAGGGCTGTCCTCAAAGAGGTCCAAGCAGCTCTGGTTTTCCCGCCATTATGTCAACCCTTTACAATCGCATGGGATTGAGTGTTACTTCTCTGTGACTGACTATGTGCCAAAAAGGCATAAGGTTACCAAGTGGCAAAGCCTGATTGCAGCTACAGTCAACTGGGTTCTTGCCATCTTGCTCGGCTTTCTGCCACTGGTTGGTTGGGATTGCTTGGAGTACGGCGACACGTCCAACCTCTACAGTCCGTTGTGTATGGGCTACTTGATCTTTGTAACCATCCCCAACACGATAGCCACCTTTGTCATCCTGTTTGAGACCTATGTGACCATCATTGTCAAAATGAGCAAATACTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU83423 lncRNA downstream 61210 37495123 ~ 37495370 (-) True G66740
TU83352 lncRNA downstream 288357 37267782 ~ 37268223 (-) True G66685
TU83275 lncRNA downstream 536784 37013981 ~ 37019796 (-) True G66613
TU83185 lncRNA downstream 686425 36869417 ~ 36870155 (-) True G66536
TU83184 lncRNA downstream 704944 36851070 ~ 36851636 (-) True G66535
TU83474 lncRNA upstream 170643 37736763 ~ 37739197 (-) True G66786
TU83511 lncRNA upstream 333347 37899467 ~ 37899878 (-) True G66817
TU83550 lncRNA upstream 614917 38181037 ~ 38181274 (-) True G66851
TU83575 lncRNA upstream 711874 38277994 ~ 38278539 (-) True G66872
TU83634 lncRNA upstream 1128872 38694992 ~ 38697487 (-) True G66920
AMCG00020938 mRNA downstream 6675 37545624 ~ 37549905 (-) True AMCG00020938
AMCG00020939 mRNA downstream 17181 37534755 ~ 37539399 (-) True AMCG00020939
AMCG00020937 mRNA downstream 28812 37524705 ~ 37527768 (-) True AMCG00020937
AMCG00020936 mRNA downstream 101712 37398299 ~ 37454868 (-) True AMCG00020936
AMCG00020934 mRNA downstream 200410 37337911 ~ 37356170 (-) True AMCG00020934
AMCG00020943 mRNA upstream 65657 37631777 ~ 37632492 (-) False AMCG00020943
AMCG00020948 mRNA upstream 206031 37772151 ~ 37814897 (-) True AMCG00020948
AMCG00020947 mRNA upstream 249774 37815894 ~ 37821863 (-) True AMCG00020947
AMCG00020949 mRNA upstream 276780 37842900 ~ 37892340 (-) True AMCG00020949
AMCG00020953 mRNA upstream 402052 37968172 ~ 38030972 (-) True AMCG00020953
TU83289 other downstream 488788 37065163 ~ 37067792 (-) False AMCG00020922
TU83279 other downstream 510641 37040447 ~ 37045939 (-) False AMCG00020923
TU83060 other downstream 1569884 35975764 ~ 35986696 (-) False AMCG00020900
TU82986 other downstream 1736750 35813969 ~ 35819830 (-) True AMCG00020887
TU82875 other downstream 1872025 35679432 ~ 35684555 (-) True G66279
TU83462 other upstream 65680 37631800 ~ 37632576 (-) True AMCG00020943
TU83728 other upstream 1484096 39050216 ~ 39104867 (-) False AMCG00020970
TU84154 other upstream 4034281 41600401 ~ 41602270 (-) False AMCG00021012

Expression Profile