RNA id: AMCG00020952


Basic Information

Item Value
RNA id AMCG00020952
length 489
RNA type mRNA
GC content 0.51
exon number 1
gene id AMCG00020952
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 38095102 ~ 38095590 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGACCCCACTGAATTGTCTAGCCATTCAcacctgtctctctcctgtgtttCCTACCTTTGTAGTCCCTACCTGTTGTGTTTCGTGGCATCGCAATGGGTGAGTCCGCTGCTGCTAGCAGTGCTTCTCCTGGCACAGTTGGAAGGGGGGCAATGCCAAGAGACAGCCACTCTGAGAGTGACAGTGCAGAAAGCCGTCGGGCTTAAAGGTGACCTCACAGGGGGAACCGATGCCTATGTCCGGGTGTTCTACGGCAGCGCTAGCCATATCACACCACACATCCAAGGGAACAACAACCCTGTCTGGAACATTGAGTACAATTTTGGAAGAGTGCCTCTGACACACCTTCTTATGTTGGATGTCTACGACAAGGATGTGACCTATGATGACTTGCTGGGCCAATGCTCTGTTACCCCTCAGAAAGGATCCTTCTCATTTAGCTGCCAACTGGGAGATGGCACCTTTTACTATTCCTACATTGCTGAGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU83511 lncRNA downstream 195224 37899467 ~ 37899878 (-) True G66817
TU83474 lncRNA downstream 355905 37736763 ~ 37739197 (-) True G66786
TU83423 lncRNA downstream 599732 37495123 ~ 37495370 (-) True G66740
TU83352 lncRNA downstream 826879 37267782 ~ 37268223 (-) True G66685
TU83275 lncRNA downstream 1075306 37013981 ~ 37019796 (-) True G66613
TU83550 lncRNA upstream 85447 38181037 ~ 38181274 (-) True G66851
TU83575 lncRNA upstream 182404 38277994 ~ 38278539 (-) True G66872
TU83634 lncRNA upstream 599402 38694992 ~ 38697487 (-) True G66920
TU83640 lncRNA upstream 611682 38707272 ~ 38732240 (-) True G66926
TU83642 lncRNA upstream 628701 38724291 ~ 38772808 (-) False G66927
AMCG00020953 mRNA downstream 64130 37968172 ~ 38030972 (-) True AMCG00020953
AMCG00020949 mRNA downstream 202762 37842900 ~ 37892340 (-) True AMCG00020949
AMCG00020947 mRNA downstream 273239 37815894 ~ 37821863 (-) True AMCG00020947
AMCG00020948 mRNA downstream 280205 37772151 ~ 37814897 (-) True AMCG00020948
AMCG00020943 mRNA downstream 462610 37631777 ~ 37632492 (-) False AMCG00020943
AMCG00020958 mRNA upstream 137076 38232666 ~ 38238994 (-) True AMCG00020958
AMCG00020957 mRNA upstream 146156 38241746 ~ 38260001 (-) True AMCG00020957
AMCG00020959 mRNA upstream 183045 38278635 ~ 38300419 (-) True AMCG00020959
AMCG00020961 mRNA upstream 270537 38366127 ~ 38410862 (-) True AMCG00020961
AMCG00020960 mRNA upstream 332290 38427880 ~ 38458638 (-) True AMCG00020960
TU83462 other downstream 462526 37631800 ~ 37632576 (-) True AMCG00020943
TU83289 other downstream 1027310 37065163 ~ 37067792 (-) False AMCG00020922
TU83279 other downstream 1049163 37040447 ~ 37045939 (-) False AMCG00020923
TU83060 other downstream 2108406 35975764 ~ 35986696 (-) False AMCG00020900
TU82986 other downstream 2275272 35813969 ~ 35819830 (-) True AMCG00020887
TU83728 other upstream 954626 39050216 ~ 39104867 (-) False AMCG00020970
TU84154 other upstream 3504811 41600401 ~ 41602270 (-) False AMCG00021012

Expression Profile