RNA id: AMCG00020976



Basic Information


Item Value
RNA id AMCG00020976
length 435
RNA type mRNA
GC content 0.54
exon number 5
gene id AMCG00020976
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 39617308 ~ 39686318 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGACAAAGACTGCCTTTTGCCAATGGCTAAACACTATGGGGTAATGGAGGAAAACCTCTCTGCAGAACTTCACCAGGCAAAtgtAAGGCGagGCGCAAGAAGGGACGATGGTCTGCCTCCTCCTCTCGGCGCATGCCGTGTCCCGACAGGAGCAGAAGAGCAGCCGATAGCTGTAGTCAATCTGGACGCGGTCGAAAAACTGTCGCAGCGCTTTGTGGCACCTCTTGCGGTTGCAGGGCTCCGGTTGCAGGCTTTGGCTGCGTCCAGGCAGGGATTACAGGGTTTCCCCACGTCTGAGCAGTGGTTGCCTTTCACGGCAGCTGGGTCCATACCTGTTGGAGAGATGTGGAAAGGGTTggattTTGCCAACAAAAGCTTTCACTTCTGTGAATGGGACAGAGAAACATGTGGCATTGATGGGCAGCAGGAGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU83754 lncRNA upstream 311721 39305297 ~ 39305587 (+) True G67027
TU83716 lncRNA upstream 567677 39049421 ~ 39049631 (+) True G66995
TU83691 lncRNA upstream 606459 39010579 ~ 39010849 (+) True G66970
TU83593 lncRNA upstream 1192056 38424712 ~ 38425252 (+) True G66887
TU83568 lncRNA upstream 1341014 38275990 ~ 38276294 (+) True G66865
TU83778 lncRNA downstream 62839 39749157 ~ 39749361 (+) True G67048
TU83931 lncRNA downstream 877884 40564202 ~ 40570215 (+) True AMCG00020993
TU83936 lncRNA downstream 884009 40570327 ~ 40571722 (+) True G67180
TU83938 lncRNA downstream 887236 40573554 ~ 40574856 (+) True G67182
TU83965 lncRNA downstream 1099443 40785761 ~ 40791471 (+) True G67207
AMCG00020978 mRNA upstream 145 39615454 ~ 39617163 (+) True AMCG00020978
AMCG00020973 mRNA upstream 555497 39047260 ~ 39061811 (+) True AMCG00020973
AMCG00020972 mRNA upstream 589781 39012711 ~ 39027527 (+) True AMCG00020972
AMCG00020969 mRNA upstream 612479 38984877 ~ 39004829 (+) True AMCG00020969
AMCG00020968 mRNA upstream 645024 38953485 ~ 38972284 (+) True AMCG00020968
AMCG00020981 mRNA downstream 114961 39801279 ~ 40063685 (+) True AMCG00020981
AMCG00020983 mRNA downstream 524824 40211142 ~ 40229767 (+) True AMCG00020983
AMCG00020982 mRNA downstream 543624 40229942 ~ 40269290 (+) True AMCG00020982
AMCG00020990 mRNA downstream 591004 40277322 ~ 40284496 (+) True AMCG00020990
AMCG00020988 mRNA downstream 625202 40311520 ~ 40319723 (+) True AMCG00020988
TU83200 other upstream 2699872 36914815 ~ 36917436 (+) True G66551
TU83151 other upstream 3360797 36254699 ~ 36256511 (+) True G66506
TU82978 other upstream 3708906 35867393 ~ 35908402 (+) True G66362
TU82915 other upstream 3866954 35747225 ~ 35750354 (+) True AMCG00020874
TU82706 other upstream 4452323 35163813 ~ 35164985 (+) True G66149
TU83857 other downstream 634795 40321113 ~ 40321821 (+) True G67108
TU84041 other downstream 1365154 41051472 ~ 41052558 (+) True AMCG00021005
TU84094 other downstream 1911905 41598223 ~ 41602113 (+) True G67323
TU84255 other downstream 2366612 42052930 ~ 42053675 (+) True G67459
TU84320 other downstream 2739793 42426111 ~ 42465886 (+) True AMCG00021029

Expression Profile