Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00020993 |
| length | 744 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 5 |
| gene id | AMCG00020993 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 40555966 ~ 40570215 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0005777 | peroxisome | cellular_component |
| GO:0045211 | postsynaptic membrane | cellular_component |
| GO:0030054 | cell junction | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0016887 | ATPase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU83778 | lncRNA | upstream | 806605 | 39749157 ~ 39749361 (+) | True | G67048 |
| TU83754 | lncRNA | upstream | 1250379 | 39305297 ~ 39305587 (+) | True | G67027 |
| TU83716 | lncRNA | upstream | 1506335 | 39049421 ~ 39049631 (+) | True | G66995 |
| TU83691 | lncRNA | upstream | 1545117 | 39010579 ~ 39010849 (+) | True | G66970 |
| TU83593 | lncRNA | upstream | 2130714 | 38424712 ~ 38425252 (+) | True | G66887 |
| TU83936 | lncRNA | downstream | 2295 | 40570327 ~ 40571722 (+) | True | G67180 |
| TU83938 | lncRNA | downstream | 5522 | 40573554 ~ 40574856 (+) | True | G67182 |
| TU83965 | lncRNA | downstream | 217729 | 40785761 ~ 40791471 (+) | True | G67207 |
| TU83966 | lncRNA | downstream | 218653 | 40786685 ~ 40791471 (+) | False | G67207 |
| TU83981 | lncRNA | downstream | 382067 | 40950099 ~ 40965912 (+) | True | G67221 |
| AMCG00020996 | mRNA | upstream | 1310 | 40544090 ~ 40554656 (+) | True | AMCG00020996 |
| AMCG00020995 | mRNA | upstream | 25912 | 40490686 ~ 40530054 (+) | True | AMCG00020995 |
| AMCG00020994 | mRNA | upstream | 99194 | 40437338 ~ 40456772 (+) | True | AMCG00020994 |
| AMCG00020987 | mRNA | upstream | 124206 | 40398936 ~ 40431760 (+) | True | AMCG00020987 |
| AMCG00020989 | mRNA | upstream | 169331 | 40369234 ~ 40386635 (+) | True | AMCG00020989 |
| AMCG00020999 | mRNA | downstream | 190465 | 40758497 ~ 40799108 (+) | True | AMCG00020999 |
| AMCG00021000 | mRNA | downstream | 254537 | 40822569 ~ 40838773 (+) | True | AMCG00021000 |
| AMCG00021002 | mRNA | downstream | 342403 | 40910435 ~ 40913147 (+) | True | AMCG00021002 |
| AMCG00021001 | mRNA | downstream | 356415 | 40924447 ~ 40939566 (+) | True | AMCG00021001 |
| AMCG00021005 | mRNA | downstream | 483513 | 41051545 ~ 41062527 (+) | False | AMCG00021005 |
| TU83857 | other | upstream | 234145 | 40321113 ~ 40321821 (+) | True | G67108 |
| TU83200 | other | upstream | 3638530 | 36914815 ~ 36917436 (+) | True | G66551 |
| TU83151 | other | upstream | 4299455 | 36254699 ~ 36256511 (+) | True | G66506 |
| TU82978 | other | upstream | 4647564 | 35867393 ~ 35908402 (+) | True | G66362 |
| TU82915 | other | upstream | 4805612 | 35747225 ~ 35750354 (+) | True | AMCG00020874 |
| TU84041 | other | downstream | 483440 | 41051472 ~ 41052558 (+) | True | AMCG00021005 |
| TU84094 | other | downstream | 1030191 | 41598223 ~ 41602113 (+) | True | G67323 |
| TU84255 | other | downstream | 1484898 | 42052930 ~ 42053675 (+) | True | G67459 |
| TU84320 | other | downstream | 1858079 | 42426111 ~ 42465886 (+) | True | AMCG00021029 |
