RNA id: AMCG00021004


Basic Information

Item Value
RNA id AMCG00021004
length 447
RNA type mRNA
GC content 0.45
exon number 4
gene id AMCG00021004
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 40997807 ~ 40999658 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAATGGACCTGCGTTGAGTGCAATTGACTTTGAAGGCCCTACAGTTGGATTGGCATACATAGGGACTTTGTGTTCAGATCAATCCACCGGAATTATACAGGACCACTCTAATAGTGCCATTGCTGTGGGGGCAACCATATCCCATGAGATGGGACACAATCTGGGCATGAATCATGACACTAGCTCTTGTCTGAACTTGTCTTTCTTTGGCAGCTATGATACTCCCAGACATTTTAGTAGCTGCAGTGACACGAGCTACGAAAAGTTCCTCAATGAGAGAAACCCAGAGTGTCTTTTAGACAAGCCAGCTAAAGAGGCCATCATTACCGATCCAGTCTGCGGCAACAGCTTCatagagaggggagaggaatgTGACTGTGGAATTGTGCAGGTACTGTACAATATTTTGGGAACCGCTTCAATTTCTTTCTTCATTGCTCCATAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU84007 lncRNA downstream 93690 40841103 ~ 40904117 (-) True G67246
TU84013 lncRNA downstream 95476 40901390 ~ 40902331 (-) True G67252
TU83939 lncRNA downstream 422951 40573021 ~ 40574856 (-) True G67183
TU83937 lncRNA downstream 425811 40570327 ~ 40571996 (-) True G67181
TU83930 lncRNA downstream 436677 40559091 ~ 40561130 (-) False AMCG00020997
TU84038 lncRNA upstream 39150 41038808 ~ 41039096 (-) True G67273
TU84042 lncRNA upstream 51826 41051484 ~ 41052538 (-) True G67277
TU84052 lncRNA upstream 103061 41102719 ~ 41103224 (-) True G67283
TU84067 lncRNA upstream 256511 41256169 ~ 41264469 (-) True G67298
TU84107 lncRNA upstream 459805 41459463 ~ 41469248 (-) True G67334
AMCG00020998 mRNA downstream 268181 40661926 ~ 40729626 (-) True AMCG00020998
AMCG00020997 mRNA downstream 357468 40557130 ~ 40640339 (-) True AMCG00020997
AMCG00020992 mRNA downstream 467197 40530158 ~ 40530610 (-) True AMCG00020992
AMCG00020991 mRNA downstream 539344 40454892 ~ 40458463 (-) True AMCG00020991
AMCG00020984 mRNA downstream 722169 40269641 ~ 40275638 (-) True AMCG00020984
AMCG00021003 mRNA upstream 522 41000180 ~ 41004194 (-) True AMCG00021003
AMCG00021006 mRNA upstream 93211 41092869 ~ 41142694 (-) True AMCG00021006
AMCG00021008 mRNA upstream 367066 41366724 ~ 41367357 (-) True AMCG00021008
AMCG00021012 mRNA upstream 596994 41596652 ~ 41602153 (-) True AMCG00021012
AMCG00021026 mRNA upstream 673951 41673609 ~ 41687703 (-) True AMCG00021026
TU83728 other downstream 1892940 39050216 ~ 39104867 (-) False AMCG00020970
TU83462 other downstream 3365231 37631800 ~ 37632576 (-) True AMCG00020943
TU83289 other downstream 3930015 37065163 ~ 37067792 (-) False AMCG00020922
TU83279 other downstream 3951868 37040447 ~ 37045939 (-) False AMCG00020923
TU83060 other downstream 5011111 35975764 ~ 35986696 (-) False AMCG00020900
TU84154 other upstream 600743 41600401 ~ 41602270 (-) False AMCG00021012

Expression Profile