RNA id: AMCG00021006



Basic Information


Item Value
RNA id AMCG00021006
length 327
RNA type mRNA
GC content 0.47
exon number 4
gene id AMCG00021006
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 41092869 ~ 41142694 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTCTGAGAGGGTGAGGCCCAAGAAGGGGGAGGTGCTGAAGCTGCTGCTGATAGAGGATCTTCCTAACCAGGCAGGGATCAGagttgtcatcatcatcatcatcatcatcatcatcatcatcatcatcattgtcacCATCCTTAGTCTCTGGAAGCCcaacctttttttcttcctctttctcttccccATTATCCTGAAATTGCTGGTCCTGGTTTTCCTGGTCTTCCTCAGTCTTGTCCTTGGAAGTCTCTGGTTCATGTTCCTTGTCCTTCATCTTGCCTACCAACTGCCCACTTCCTGGACTTCCCTGGACATTGTGTTGTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU84042 lncRNA downstream 40331 41051484 ~ 41052538 (-) True G67277
TU84038 lncRNA downstream 53773 41038808 ~ 41039096 (-) True G67273
TU84007 lncRNA downstream 188752 40841103 ~ 40904117 (-) True G67246
TU84013 lncRNA downstream 190538 40901390 ~ 40902331 (-) True G67252
TU83939 lncRNA downstream 518013 40573021 ~ 40574856 (-) True G67183
TU84067 lncRNA upstream 113475 41256169 ~ 41264469 (-) True G67298
TU84107 lncRNA upstream 316769 41459463 ~ 41469248 (-) True G67334
TU84113 lncRNA upstream 331611 41474305 ~ 41481139 (-) True G67339
TU84127 lncRNA upstream 365025 41507719 ~ 41508093 (-) True G67352
TU84133 lncRNA upstream 376023 41518717 ~ 41520497 (-) True G67358
AMCG00021003 mRNA downstream 88675 41000180 ~ 41004194 (-) True AMCG00021003
AMCG00021004 mRNA downstream 93211 40997807 ~ 40999658 (-) True AMCG00021004
AMCG00020998 mRNA downstream 363243 40661926 ~ 40729626 (-) True AMCG00020998
AMCG00020997 mRNA downstream 452530 40557130 ~ 40640339 (-) True AMCG00020997
AMCG00020992 mRNA downstream 562259 40530158 ~ 40530610 (-) True AMCG00020992
AMCG00021008 mRNA upstream 224030 41366724 ~ 41367357 (-) True AMCG00021008
AMCG00021012 mRNA upstream 453958 41596652 ~ 41602153 (-) True AMCG00021012
AMCG00021026 mRNA upstream 530915 41673609 ~ 41687703 (-) True AMCG00021026
AMCG00021027 mRNA upstream 832165 41974859 ~ 41975161 (-) True AMCG00021027
AMCG00021028 mRNA upstream 857955 42000649 ~ 42117898 (-) True AMCG00021028
TU83728 other downstream 1988002 39050216 ~ 39104867 (-) False AMCG00020970
TU83462 other downstream 3460293 37631800 ~ 37632576 (-) True AMCG00020943
TU83289 other downstream 4025077 37065163 ~ 37067792 (-) False AMCG00020922
TU83279 other downstream 4046930 37040447 ~ 37045939 (-) False AMCG00020923
TU83060 other downstream 5106173 35975764 ~ 35986696 (-) False AMCG00020900
TU84154 other upstream 457707 41600401 ~ 41602270 (-) False AMCG00021012

Expression Profile