RNA id: AMCG00021008



Basic Information


Item Value
RNA id AMCG00021008
length 594
RNA type mRNA
GC content 0.44
exon number 3
gene id AMCG00021008
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 41366724 ~ 41367357 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


atggCGGGAAAAGAGAGTGAGTCTCGGAGTCTGAGAGGATCTTACTTACACCAAAACAAGGCTTCCAAAACTTTGTTCGAGCACTCAATCCACGTGAGCAATCGCATTGCTAAGCTTTATGATAACACTGCCAAGAGTGTGAAAGTCTCACTAAACAATCGATCTGTGGCCTTGACAACAGATGGATGGACTTCTCtacacactgatgcacatgtCACAGTCACTGCACATTTTATATCAGATGACTGGGAAATCAAAAACTATCTGATGAAAACAGAAGAGCTGAGAGAAAGTCATACTGGCGAAAAATGTGATGTCAAACTGGGGCATTTGATGTCAAACTGGATGACTACGGATAATGCGGGGAATTATGTGAAGGCAGTTGAGAGTCATATGAGACGAGTGAACATTCCATGTTTGGCGCACACACTAAATCTGGCTGTATGTAAGGGGCTTCGTGGTGTTCGAGCAATCAAAATGGCGACCGCTGCCCATTTCAGCAAGTCAGCTGTTGACAGCTACCTGCtcgagaagaaacaaaaactactCAAAGTTAAATCGGACAAGCTTATCAATGACTGCTCGACCCGATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU84067 lncRNA downstream 102255 41256169 ~ 41264469 (-) True G67298
TU84052 lncRNA downstream 263500 41102719 ~ 41103224 (-) True G67283
TU84042 lncRNA downstream 314186 41051484 ~ 41052538 (-) True G67277
TU84038 lncRNA downstream 327628 41038808 ~ 41039096 (-) True G67273
TU84007 lncRNA downstream 462607 40841103 ~ 40904117 (-) True G67246
TU84107 lncRNA upstream 92106 41459463 ~ 41469248 (-) True G67334
TU84113 lncRNA upstream 106948 41474305 ~ 41481139 (-) True G67339
TU84127 lncRNA upstream 140362 41507719 ~ 41508093 (-) True G67352
TU84133 lncRNA upstream 151360 41518717 ~ 41520497 (-) True G67358
TU84135 lncRNA upstream 183058 41550415 ~ 41570291 (-) True G67360
AMCG00021006 mRNA downstream 224030 41092869 ~ 41142694 (-) True AMCG00021006
AMCG00021003 mRNA downstream 362530 41000180 ~ 41004194 (-) True AMCG00021003
AMCG00021004 mRNA downstream 367066 40997807 ~ 40999658 (-) True AMCG00021004
AMCG00020998 mRNA downstream 637098 40661926 ~ 40729626 (-) True AMCG00020998
AMCG00020997 mRNA downstream 726385 40557130 ~ 40640339 (-) True AMCG00020997
AMCG00021012 mRNA upstream 229295 41596652 ~ 41602153 (-) True AMCG00021012
AMCG00021026 mRNA upstream 306252 41673609 ~ 41687703 (-) True AMCG00021026
AMCG00021027 mRNA upstream 607502 41974859 ~ 41975161 (-) True AMCG00021027
AMCG00021028 mRNA upstream 633292 42000649 ~ 42117898 (-) True AMCG00021028
AMCG00021031 mRNA upstream 869884 42237241 ~ 42238378 (-) True AMCG00021031
TU83728 other downstream 2261857 39050216 ~ 39104867 (-) False AMCG00020970
TU83462 other downstream 3734148 37631800 ~ 37632576 (-) True AMCG00020943
TU83289 other downstream 4298932 37065163 ~ 37067792 (-) False AMCG00020922
TU83279 other downstream 4320785 37040447 ~ 37045939 (-) False AMCG00020923
TU83060 other downstream 5380028 35975764 ~ 35986696 (-) False AMCG00020900
TU84154 other upstream 233044 41600401 ~ 41602270 (-) False AMCG00021012

Expression Profile