RNA id: AMCG00021027


Basic Information

Item Value
RNA id AMCG00021027
length 303
RNA type mRNA
GC content 0.47
exon number 1
gene id AMCG00021027
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 41974859 ~ 41975161 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTGCGATCGTGCTCTGCACAGGAAAACGCTATGGTGGCCTCTCTCCGTGTGGCATGGATACTTGGTAGAAAGAAGAGACCTTTTACGGACTCTGAGACTGTGAAAGAGTGCTTGCTAGCTGCCATTGAGGAGGTGACACCGGACGAGAAAGTGAGAAACCAGGTGATGTCCTCgattaaatatatatccatGTCGGACACATCAACTACAAGGAGAATTGAAATTCTTGCTATGGAGGTTTTTGAAACGCTGTTGGACAGACTGAAGAAGGCAGAGACAATGTCCCTGGCTGTGTACTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU84234 lncRNA downstream 80875 41891038 ~ 41893984 (-) True G67440
TU84151 lncRNA downstream 377336 41596080 ~ 41597523 (-) False AMCG00021012
TU84148 lncRNA downstream 382130 41592521 ~ 41592729 (-) True G67368
TU84135 lncRNA downstream 404568 41550415 ~ 41570291 (-) True G67360
TU84133 lncRNA downstream 454362 41518717 ~ 41520497 (-) True G67358
TU84258 lncRNA upstream 100162 42075323 ~ 42075754 (-) True G67462
TU84276 lncRNA upstream 174432 42149593 ~ 42149966 (-) True G67480
TU84322 lncRNA upstream 428660 42403821 ~ 42404270 (-) True G67522
TU84334 lncRNA upstream 508424 42483585 ~ 42484218 (-) True G67534
TU84337 lncRNA upstream 610666 42585827 ~ 42586109 (-) True G67537
AMCG00021026 mRNA downstream 287156 41673609 ~ 41687703 (-) True AMCG00021026
AMCG00021012 mRNA downstream 372706 41596652 ~ 41602153 (-) True AMCG00021012
AMCG00021008 mRNA downstream 607502 41366724 ~ 41367357 (-) True AMCG00021008
AMCG00021006 mRNA downstream 832165 41092869 ~ 41142694 (-) True AMCG00021006
AMCG00021003 mRNA downstream 970665 41000180 ~ 41004194 (-) True AMCG00021003
AMCG00021028 mRNA upstream 25488 42000649 ~ 42117898 (-) True AMCG00021028
AMCG00021031 mRNA upstream 262080 42237241 ~ 42238378 (-) True AMCG00021031
AMCG00021032 mRNA upstream 270836 42245997 ~ 42269261 (-) True AMCG00021032
AMCG00021030 mRNA upstream 327765 42302926 ~ 42315442 (-) True AMCG00021030
AMCG00021033 mRNA upstream 346946 42322107 ~ 42350197 (-) True AMCG00021033
TU84154 other downstream 372589 41600401 ~ 41602270 (-) False AMCG00021012
TU83728 other downstream 2869992 39050216 ~ 39104867 (-) False AMCG00020970
TU83462 other downstream 4342283 37631800 ~ 37632576 (-) True AMCG00020943
TU83289 other downstream 4907067 37065163 ~ 37067792 (-) False AMCG00020922
TU83279 other downstream 4928920 37040447 ~ 37045939 (-) False AMCG00020923

Expression Profile