RNA id: TU74144


Basic Information

Item Value
RNA id TU74144
length 266
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G59283
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 167758 ~ 168023 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ggcagccagtgaagagaagccaatactggagtgatgtgttcatgtttttttgtttttgttaggattcttgcagcagcattttggactgaagtgcagaaatagctctgtttgtgctgcctgacagaatggcattacagtaatccaatctagatgtaacaaatgcgtctatcaatttctcagtgtcctgtaacgagaggaattgtcttagtctagcaatgtttctaagctggaggaaggaagatctcgacacattctgaatgtgtgat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74141 lncRNA downstream 68664 96833 ~ 99094 (-) True G59280
TU74184 lncRNA upstream 214629 382652 ~ 382855 (-) True G59322
TU74186 lncRNA upstream 277573 445596 ~ 446868 (-) True G59324
TU74226 lncRNA upstream 379803 547826 ~ 557376 (-) False AMCG00019880
TU74236 lncRNA upstream 764286 932309 ~ 958515 (-) True G59362
TU74264 lncRNA upstream 1096471 1264494 ~ 1264734 (-) True G59388
AMCG00019875 mRNA upstream 67495 235518 ~ 240133 (-) True AMCG00019875
AMCG00019878 mRNA upstream 287437 455460 ~ 481521 (-) True AMCG00019878
AMCG00019880 mRNA upstream 367808 535831 ~ 572827 (-) True AMCG00019880
AMCG00019881 mRNA upstream 414327 582350 ~ 593396 (-) True AMCG00019881
AMCG00019882 mRNA upstream 701038 869061 ~ 870896 (-) True AMCG00019882
TU74284 other upstream 1416896 1584919 ~ 1586000 (-) True G59408
TU74395 other upstream 2156265 2324288 ~ 2327415 (-) True G59505
TU74434 other upstream 2286888 2454911 ~ 2480799 (-) True G59530
TU74449 other upstream 2326876 2494899 ~ 2507020 (-) True G59545
TU74667 other upstream 2863833 3031856 ~ 3034335 (-) True G59712

Expression Profile