RNA id: TU74150


Basic Information

Item Value
RNA id TU74150
length 771
lncRNA type inter_gene
GC content 0.53
exon number 1
gene id G59289
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 219605 ~ 220375 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

cacctatatatataaggtcccacagttaacagtgcatgtcagagcacaaaccaatccatgaagtccaaggaattgtctgtagacctctgagacaggattgtatcaaggcacagatctggggaagggaaCAGAAAAAatttggggggtggatgaggaacctcaccatgtcatttggtaggtctggtcgctgaggtaggaggagaaccaggtgagagcagtcccagagattccaaggtcagcgaggcaggagaggaggatggagtgatcaacggtgtcaaatgctgcggagaggtcaaggaggatgaggactgaggagagggaggccgcctgaGGACAtgtgagggagtcagtgactgccaggagagccgtctcagtggagtgagctgtgcggaagccggattgcaaggatcaaggagtgagtgttgggacagaaagtcagagagctgacagtggaccgcCTGCTccagagtctttgagaggaaggggagtagggagacagggcggtagttctgaggagaggtggcatcaagggttggtttcttgagtgggatgacagcagcttgtttgaGTGccgaggggaaacagccagagatgagtgaggagttgaggagggccgagatgaaggggagaagatcaggagcagtcacttggaggaggcgagaagggagagggtccagggcacatgttgtaggtttgtgacgtaggaggagagcggaaacttcagcatctgagagaggtgagaatgaagaaaaggaagcttaaTCGGTGGGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74160 lncRNA downstream 25537 245912 ~ 246217 (+) True G59299
TU74165 lncRNA downstream 47373 267748 ~ 267963 (+) True G59304
TU74167 lncRNA downstream 225257 445632 ~ 446858 (+) True G59306
TU74216 lncRNA downstream 711926 932301 ~ 1002892 (+) True G59351
TU74257 lncRNA downstream 964908 1185283 ~ 1186234 (+) True G59381
AMCG00019873 mRNA upstream 115957 77166 ~ 103648 (+) True AMCG00019873
AMCG00019872 mRNA upstream 144342 48107 ~ 75263 (+) True AMCG00019872
AMCG00019874 mRNA downstream 19984 240359 ~ 270653 (+) True AMCG00019874
AMCG00019876 mRNA downstream 60966 281341 ~ 297312 (+) True AMCG00019876
AMCG00019877 mRNA downstream 164651 385026 ~ 418105 (+) True AMCG00019877
AMCG00019879 mRNA downstream 353383 573758 ~ 575695 (+) True AMCG00019879
AMCG00019884 mRNA downstream 854441 1074816 ~ 1108996 (+) True AMCG00019884
TU74166 other downstream 221223 441598 ~ 445530 (+) True G59305
TU74243 other downstream 855129 1075504 ~ 1078063 (+) False AMCG00019884
TU74774 other downstream 3021064 3241439 ~ 3250062 (+) False AMCG00019934
TU75012 other downstream 4603438 4823813 ~ 4835797 (+) False AMCG00019967
TU75242 other downstream 5135397 5355772 ~ 5361863 (+) True G60137

Expression Profile