RNA id: TU74186


Basic Information

Item Value
RNA id TU74186
length 1273
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G59324
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 445596 ~ 446868 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gttttatttctaaacaaTACAGAACAggaaaagtaacattttattcCTTTTGCTAATCATGTTGAGGAACCttggaaaatatacagtacaccAGATGTCTGTTGTGTGATCAACCAGAGCACCAAAATAACATACGCAGctgtggaagaaaagaaaagaaaagaaaaaaataatccagagaaagaacaaaaaacaacaaaacacaaacacaaaattgatCGTGGTAAGTGCCCAacacagtgcattgtgggtatggACTGAGCGGAGTGGATTCCACCAAGTTTAAACAGTGCTTATGGATACCATAACAGTGTAAAGTACAGATCTAACCCTCTGCCACATCGCAAAGCGGGGAAACGGCCCGGAGCGGGGGCTCCGTTCAACGGGGACAGAGGGGCCTGAGGGGCCTGAGGCCTCTGACATGTTGCTCTGTGTGGGTTGTGTACATTCAGTGCACTTTCAGAAAGCAGGGGATGGTGGCTATGGGATGGGGGGACTGGAGGGGGAAGTTTCCTATCGACACCCGTTTCAGCAACAAGACGACGACAGCCTGTCCGAGCGACGGCCAGGCGCCCCTTTGTGTGGCGCACTTCAGTATCGCTCTTTCCCTTCACGTTGCTTCTTCTTTTGGAAAACCTTATCTTTCTTCACTGAAGGTTAGCGCTCGAGACGAGTGTGACGTGTGATGGCTCAAGTGGCTGCCGCTGTCCGTTCAGGGCGagttaatatttaatagaaCTAAAATAGCGAGCTGCTCTGTTAATTTCCTCCTTCAACTGAGACTCGCTCTTCAACCTCAACGTGTCCGACCGTTTGACAATAGGCAACAATATTACTGCGACTATTCTGCATACCTGACCAGAGAAACAAACGCAATTCCAAGCAGCGCATCTCAACTGTCCAGCTCTAGCTTACACGCCTGAGACATACGGACACTTCACACCCGTACGGCTCTGCCTGTCTACTGCGCTGTGGGAGCGTGTGCAGAGCGGTCCGGCTGTCTATCCTGTCTCTCGTCAATGTCTGGTCTCTGGTCTCGTGTCACTGCAGTCACGCTACACCGCGGCGCTCACTGCGCTTCTACGCAACGCCCCTAGGATGATGACGGCCAATGTTGAGGTTTAGGAAAACACGTGGACCCCCTTCACAAGCCATGGGGCGCCACCTATGGAAACTTCCTCAAGCGTCCCTGTCCGTACCGGATATGGAAATCTTTCATATAGCAAAGGAAATGAGAGATGATTACACTTCAATATAAACTCTAaaatatata

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74184 lncRNA downstream 62741 382652 ~ 382855 (-) True G59322
TU74144 lncRNA downstream 277573 167758 ~ 168023 (-) True G59283
TU74141 lncRNA downstream 346502 96833 ~ 99094 (-) True G59280
TU74226 lncRNA upstream 100958 547826 ~ 557376 (-) False AMCG00019880
TU74236 lncRNA upstream 485441 932309 ~ 958515 (-) True G59362
TU74264 lncRNA upstream 817626 1264494 ~ 1264734 (-) True G59388
TU74266 lncRNA upstream 837557 1284425 ~ 1284745 (-) True G59390
TU74271 lncRNA upstream 900378 1347246 ~ 1347479 (-) True G59395
AMCG00019875 mRNA downstream 205463 235518 ~ 240133 (-) True AMCG00019875
AMCG00019878 mRNA upstream 8592 455460 ~ 481521 (-) True AMCG00019878
AMCG00019880 mRNA upstream 88963 535831 ~ 572827 (-) True AMCG00019880
AMCG00019881 mRNA upstream 135482 582350 ~ 593396 (-) True AMCG00019881
AMCG00019882 mRNA upstream 422193 869061 ~ 870896 (-) True AMCG00019882
AMCG00019883 mRNA upstream 498030 944898 ~ 945889 (-) True AMCG00019883
TU74284 other upstream 1138051 1584919 ~ 1586000 (-) True G59408
TU74395 other upstream 1877420 2324288 ~ 2327415 (-) True G59505
TU74434 other upstream 2008043 2454911 ~ 2480799 (-) True G59530
TU74449 other upstream 2048031 2494899 ~ 2507020 (-) True G59545
TU74667 other upstream 2584988 3031856 ~ 3034335 (-) True G59712

Expression Profile