RNA id: TU74263



Basic Information


Item Value
RNA id TU74263
length 248
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G59387
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 1264492 ~ 1264739 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tagtccctttagtacctcctcctcatttatcctgatctctcttagggtttgactggactgattgtcaacctgtggcatgtcatctgttttttcttttgtaaaaacctctgtgaaatactcatttagaacatttgccacatcttgttcgttttccaagatacctccatttttgccctttatctgtttcacttcctcctttattgaccgcttgctgttgtaatattgaaaaaagctctttgcattggttt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU74261 lncRNA upstream 35287 1228946 ~ 1229205 (+) True G59385
TU74257 lncRNA upstream 78258 1185283 ~ 1186234 (+) True G59381
TU74216 lncRNA upstream 261600 932301 ~ 1002892 (+) True G59351
TU74167 lncRNA upstream 817634 445632 ~ 446858 (+) True G59306
TU74165 lncRNA upstream 996529 267748 ~ 267963 (+) True G59304
TU74278 lncRNA downstream 228946 1493685 ~ 1493889 (+) True G59402
TU74287 lncRNA downstream 344278 1609017 ~ 1609373 (+) True G59411
TU74302 lncRNA downstream 532187 1796926 ~ 1797141 (+) True G59425
TU74319 lncRNA downstream 769822 2034561 ~ 2034794 (+) True G59440
TU74340 lncRNA downstream 897196 2161935 ~ 2163604 (+) True G59459
AMCG00019885 mRNA upstream 135802 1124534 ~ 1128690 (+) True AMCG00019885
AMCG00019884 mRNA upstream 155496 1074816 ~ 1108996 (+) True AMCG00019884
AMCG00019879 mRNA upstream 688797 573758 ~ 575695 (+) True AMCG00019879
AMCG00019877 mRNA upstream 846387 385026 ~ 418105 (+) True AMCG00019877
AMCG00019876 mRNA upstream 967180 281341 ~ 297312 (+) True AMCG00019876
AMCG00019886 mRNA downstream 320284 1585023 ~ 1585622 (+) True AMCG00019886
AMCG00019894 mRNA downstream 1009640 2274379 ~ 2327335 (+) True AMCG00019894
AMCG00019893 mRNA downstream 1076049 2340788 ~ 2351023 (+) True AMCG00019893
AMCG00019898 mRNA downstream 1150125 2414864 ~ 2416601 (+) True AMCG00019898
AMCG00019896 mRNA downstream 1178512 2443251 ~ 2454771 (+) True AMCG00019896
TU74243 other upstream 186429 1075504 ~ 1078063 (+) False AMCG00019884
TU74166 other upstream 818962 441598 ~ 445530 (+) True G59305
TU74774 other downstream 1976700 3241439 ~ 3250062 (+) False AMCG00019934
TU75012 other downstream 3559074 4823813 ~ 4835797 (+) False AMCG00019967
TU75242 other downstream 4091033 5355772 ~ 5361863 (+) True G60137
TU75235 other downstream 4093725 5358464 ~ 5359365 (+) True G60132
TU75390 other downstream 4917973 6182712 ~ 6186084 (+) False AMCG00020000

Expression Profile