RNA id: TU74266


Basic Information

Item Value
RNA id TU74266
length 321
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G59390
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 1284425 ~ 1284745 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ccattcgccccatcgtgctcgtttggtgtccattaataactgagtgatcaaggatcctatccagtctgtttttgaatgttcccaaattgtctcttcagacacatcgctggggagtttgttcagattgtgacgcctctctgtgtgaagaagtgtctcctgttttctgtcttgaatgccttgaagcccaattttcatttgtgtcccgggtgcatgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgatttcgaagacttggatcaagtccccacgtagtctcctctgttccagggtga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74264 lncRNA downstream 19691 1264494 ~ 1264734 (-) True G59388
TU74236 lncRNA downstream 325910 932309 ~ 958515 (-) True G59362
TU74226 lncRNA downstream 727049 547826 ~ 557376 (-) False AMCG00019880
TU74186 lncRNA downstream 837557 445596 ~ 446868 (-) True G59324
TU74184 lncRNA downstream 901570 382652 ~ 382855 (-) True G59322
TU74271 lncRNA upstream 62501 1347246 ~ 1347479 (-) True G59395
TU74272 lncRNA upstream 104600 1389345 ~ 1397225 (-) True G59396
TU74279 lncRNA upstream 208941 1493686 ~ 1493973 (-) True G59403
TU74290 lncRNA upstream 320357 1605102 ~ 1662179 (-) True G59414
TU74365 lncRNA upstream 907589 2192334 ~ 2192547 (-) True G59484
AMCG00019883 mRNA downstream 338536 944898 ~ 945889 (-) True AMCG00019883
AMCG00019882 mRNA downstream 413529 869061 ~ 870896 (-) True AMCG00019882
AMCG00019881 mRNA downstream 691029 582350 ~ 593396 (-) True AMCG00019881
AMCG00019880 mRNA downstream 711598 535831 ~ 572827 (-) True AMCG00019880
AMCG00019878 mRNA downstream 802904 455460 ~ 481521 (-) True AMCG00019878
AMCG00019887 mRNA upstream 589815 1874560 ~ 1889869 (-) True AMCG00019887
AMCG00019888 mRNA upstream 628696 1913441 ~ 1920755 (-) True AMCG00019888
AMCG00019889 mRNA upstream 821085 2105830 ~ 2135939 (-) True AMCG00019889
AMCG00019890 mRNA upstream 875433 2160178 ~ 2185195 (-) True AMCG00019890
AMCG00019891 mRNA upstream 926932 2211677 ~ 2212773 (-) True AMCG00019891
TU74284 other upstream 300174 1584919 ~ 1586000 (-) True G59408
TU74395 other upstream 1039543 2324288 ~ 2327415 (-) True G59505
TU74434 other upstream 1170166 2454911 ~ 2480799 (-) True G59530
TU74449 other upstream 1210154 2494899 ~ 2507020 (-) True G59545
TU74667 other upstream 1747111 3031856 ~ 3034335 (-) True G59712

Expression Profile