RNA id: TU74271



Basic Information


Item Value
RNA id TU74271
length 234
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G59395
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 1347246 ~ 1347479 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tggaaattgggcttcaaggcattcaagacagaaaacaggagacacttcttcacacagagaggcatcacaatctgaacaaactccccagcgatgtggctgaagagacaatttgggaacattcaaaaacagactggataggatccttgatcacttagttattaatggacaccaaacgagcacgatggggcgaatggcctcctctcgactggacactttcttatgttcttatgttct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU74266 lncRNA downstream 62501 1284425 ~ 1284745 (-) True G59390
TU74264 lncRNA downstream 82512 1264494 ~ 1264734 (-) True G59388
TU74236 lncRNA downstream 388731 932309 ~ 958515 (-) True G59362
TU74226 lncRNA downstream 789870 547826 ~ 557376 (-) False AMCG00019880
TU74186 lncRNA downstream 900378 445596 ~ 446868 (-) True G59324
TU74272 lncRNA upstream 41866 1389345 ~ 1397225 (-) True G59396
TU74279 lncRNA upstream 146207 1493686 ~ 1493973 (-) True G59403
TU74290 lncRNA upstream 257623 1605102 ~ 1662179 (-) True G59414
TU74365 lncRNA upstream 844855 2192334 ~ 2192547 (-) True G59484
TU74366 lncRNA upstream 848324 2195803 ~ 2205765 (-) False G59485
AMCG00019883 mRNA downstream 401357 944898 ~ 945889 (-) True AMCG00019883
AMCG00019882 mRNA downstream 476350 869061 ~ 870896 (-) True AMCG00019882
AMCG00019881 mRNA downstream 753850 582350 ~ 593396 (-) True AMCG00019881
AMCG00019880 mRNA downstream 774419 535831 ~ 572827 (-) True AMCG00019880
AMCG00019878 mRNA downstream 865725 455460 ~ 481521 (-) True AMCG00019878
AMCG00019887 mRNA upstream 527081 1874560 ~ 1889869 (-) True AMCG00019887
AMCG00019888 mRNA upstream 565962 1913441 ~ 1920755 (-) True AMCG00019888
AMCG00019889 mRNA upstream 758351 2105830 ~ 2135939 (-) True AMCG00019889
AMCG00019890 mRNA upstream 812699 2160178 ~ 2185195 (-) True AMCG00019890
AMCG00019891 mRNA upstream 864198 2211677 ~ 2212773 (-) True AMCG00019891
TU74284 other upstream 237440 1584919 ~ 1586000 (-) True G59408
TU74395 other upstream 976809 2324288 ~ 2327415 (-) True G59505
TU74434 other upstream 1107432 2454911 ~ 2480799 (-) True G59530
TU74449 other upstream 1147420 2494899 ~ 2507020 (-) True G59545
TU74667 other upstream 1684377 3031856 ~ 3034335 (-) True G59712

Expression Profile