RNA id: TU74279



Basic Information


Item Value
RNA id TU74279
length 288
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G59403
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 1493686 ~ 1493973 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


aggaactgaaccttttcaccctggaacagaggagactacgtggggacttgatccaagtcttcaaaatcatgagaGGCATCGACcccatcaaaccagaggagcttttccagatcagcagggacacacgcacccggggacacaaatggaaattgggcttcaaggcattcaagacagaaaacaggagacacttcttcacacagagaggcgtcacaatctgaacaaactccccagcgatgtggctgaagagactatttgggaacattcaaaaacagactggataggatcctt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU74272 lncRNA downstream 96461 1389345 ~ 1397225 (-) True G59396
TU74271 lncRNA downstream 146207 1347246 ~ 1347479 (-) True G59395
TU74266 lncRNA downstream 208941 1284425 ~ 1284745 (-) True G59390
TU74264 lncRNA downstream 228952 1264494 ~ 1264734 (-) True G59388
TU74236 lncRNA downstream 535171 932309 ~ 958515 (-) True G59362
TU74290 lncRNA upstream 111129 1605102 ~ 1662179 (-) True G59414
TU74365 lncRNA upstream 698361 2192334 ~ 2192547 (-) True G59484
TU74366 lncRNA upstream 701830 2195803 ~ 2205765 (-) False G59485
TU74368 lncRNA upstream 701830 2195803 ~ 2221194 (-) True G59485
TU74466 lncRNA upstream 1080831 2574804 ~ 2575670 (-) True G59556
AMCG00019883 mRNA downstream 547797 944898 ~ 945889 (-) True AMCG00019883
AMCG00019882 mRNA downstream 622790 869061 ~ 870896 (-) True AMCG00019882
AMCG00019881 mRNA downstream 900290 582350 ~ 593396 (-) True AMCG00019881
AMCG00019880 mRNA downstream 920859 535831 ~ 572827 (-) True AMCG00019880
AMCG00019878 mRNA downstream 1012165 455460 ~ 481521 (-) True AMCG00019878
AMCG00019887 mRNA upstream 380587 1874560 ~ 1889869 (-) True AMCG00019887
AMCG00019888 mRNA upstream 419468 1913441 ~ 1920755 (-) True AMCG00019888
AMCG00019889 mRNA upstream 611857 2105830 ~ 2135939 (-) True AMCG00019889
AMCG00019890 mRNA upstream 666205 2160178 ~ 2185195 (-) True AMCG00019890
AMCG00019891 mRNA upstream 717704 2211677 ~ 2212773 (-) True AMCG00019891
TU74284 other upstream 90946 1584919 ~ 1586000 (-) True G59408
TU74395 other upstream 830315 2324288 ~ 2327415 (-) True G59505
TU74434 other upstream 960938 2454911 ~ 2480799 (-) True G59530
TU74449 other upstream 1000926 2494899 ~ 2507020 (-) True G59545
TU74667 other upstream 1537883 3031856 ~ 3034335 (-) True G59712

Expression Profile