RNA id: TU74302


Basic Information

Item Value
RNA id TU74302
length 216
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G59425
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 1796926 ~ 1797141 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ccaaattgtctcttcagccacatcgctggggagtttgttcagattgtgacgcctctctgtgtgaagaagtgtctcctgttttctgtcttgaatgccttgaagcccaatttccatttgtgtccccgggtgcgtgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgatgttgaagacttgaatcaagtcccca

Function

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0046578 regulation of Ras protein signal transduction biological_process
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0007265 Ras protein signal transduction biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74287 lncRNA upstream 187553 1609017 ~ 1609373 (+) True G59411
TU74278 lncRNA upstream 303037 1493685 ~ 1493889 (+) True G59402
TU74263 lncRNA upstream 532187 1264492 ~ 1264739 (+) True G59387
TU74261 lncRNA upstream 567721 1228946 ~ 1229205 (+) True G59385
TU74257 lncRNA upstream 610692 1185283 ~ 1186234 (+) True G59381
TU74319 lncRNA downstream 237420 2034561 ~ 2034794 (+) True G59440
TU74340 lncRNA downstream 364794 2161935 ~ 2163604 (+) True G59459
TU74341 lncRNA downstream 367380 2164521 ~ 2167440 (+) True G59460
TU74348 lncRNA downstream 383462 2180603 ~ 2181069 (+) True G59467
TU74467 lncRNA downstream 786553 2583694 ~ 2634130 (+) True G59557
AMCG00019886 mRNA upstream 211304 1585023 ~ 1585622 (+) True AMCG00019886
AMCG00019885 mRNA upstream 668236 1124534 ~ 1128690 (+) True AMCG00019885
AMCG00019884 mRNA upstream 687930 1074816 ~ 1108996 (+) True AMCG00019884
AMCG00019879 mRNA upstream 1221231 573758 ~ 575695 (+) True AMCG00019879
AMCG00019877 mRNA upstream 1378821 385026 ~ 418105 (+) True AMCG00019877
AMCG00019894 mRNA downstream 477238 2274379 ~ 2327335 (+) True AMCG00019894
AMCG00019893 mRNA downstream 543647 2340788 ~ 2351023 (+) True AMCG00019893
AMCG00019898 mRNA downstream 617723 2414864 ~ 2416601 (+) True AMCG00019898
AMCG00019896 mRNA downstream 646110 2443251 ~ 2454771 (+) True AMCG00019896
AMCG00019897 mRNA downstream 684764 2481905 ~ 2483959 (+) True AMCG00019897
TU74243 other upstream 718863 1075504 ~ 1078063 (+) False AMCG00019884
TU74166 other upstream 1351396 441598 ~ 445530 (+) True G59305
TU74774 other downstream 1444298 3241439 ~ 3250062 (+) False AMCG00019934
TU75012 other downstream 3026672 4823813 ~ 4835797 (+) False AMCG00019967
TU75242 other downstream 3558631 5355772 ~ 5361863 (+) True G60137
TU75235 other downstream 3561323 5358464 ~ 5359365 (+) True G60132
TU75390 other downstream 4385571 6182712 ~ 6186084 (+) False AMCG00020000

Expression Profile