Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU74340 |
| length | 1380 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G59459 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 2161935 ~ 2163604 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0009123 | nucleoside monophosphate metabolic process | biological_process |
| GO:0009124 | nucleoside monophosphate biosynthetic process | biological_process |
| GO:0009126 | purine nucleoside monophosphate metabolic process | biological_process |
| GO:0009127 | purine nucleoside monophosphate biosynthetic process | biological_process |
| GO:0009156 | ribonucleoside monophosphate biosynthetic process | biological_process |
| GO:0009161 | ribonucleoside monophosphate metabolic process | biological_process |
| GO:0009167 | purine ribonucleoside monophosphate metabolic process | biological_process |
| GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | biological_process |
| GO:1990351 | transporter complex | cellular_component |
| GO:0034702 | ion channel complex | cellular_component |
| GO:0034703 | cation channel complex | cellular_component |
| GO:0034704 | calcium channel complex | cellular_component |
| GO:0005891 | voltage-gated calcium channel complex | cellular_component |
| GO:1902495 | transmembrane transporter complex | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU74319 | lncRNA | upstream | 127141 | 2034561 ~ 2034794 (+) | True | G59440 |
| TU74302 | lncRNA | upstream | 364794 | 1796926 ~ 1797141 (+) | True | G59425 |
| TU74287 | lncRNA | upstream | 552562 | 1609017 ~ 1609373 (+) | True | G59411 |
| TU74278 | lncRNA | upstream | 668046 | 1493685 ~ 1493889 (+) | True | G59402 |
| TU74263 | lncRNA | upstream | 897196 | 1264492 ~ 1264739 (+) | True | G59387 |
| TU74341 | lncRNA | downstream | 917 | 2164521 ~ 2167440 (+) | True | G59460 |
| TU74348 | lncRNA | downstream | 16999 | 2180603 ~ 2181069 (+) | True | G59467 |
| TU74467 | lncRNA | downstream | 420090 | 2583694 ~ 2634130 (+) | True | G59557 |
| TU74468 | lncRNA | downstream | 420090 | 2583694 ~ 2588069 (+) | False | G59557 |
| TU74500 | lncRNA | downstream | 551924 | 2715528 ~ 2716915 (+) | True | G59578 |
| AMCG00019886 | mRNA | upstream | 576313 | 1585023 ~ 1585622 (+) | True | AMCG00019886 |
| AMCG00019885 | mRNA | upstream | 1033245 | 1124534 ~ 1128690 (+) | True | AMCG00019885 |
| AMCG00019884 | mRNA | upstream | 1052939 | 1074816 ~ 1108996 (+) | True | AMCG00019884 |
| AMCG00019879 | mRNA | upstream | 1586240 | 573758 ~ 575695 (+) | True | AMCG00019879 |
| AMCG00019877 | mRNA | upstream | 1743830 | 385026 ~ 418105 (+) | True | AMCG00019877 |
| AMCG00019894 | mRNA | downstream | 110775 | 2274379 ~ 2327335 (+) | True | AMCG00019894 |
| AMCG00019893 | mRNA | downstream | 177184 | 2340788 ~ 2351023 (+) | True | AMCG00019893 |
| AMCG00019898 | mRNA | downstream | 251260 | 2414864 ~ 2416601 (+) | True | AMCG00019898 |
| AMCG00019896 | mRNA | downstream | 279647 | 2443251 ~ 2454771 (+) | True | AMCG00019896 |
| AMCG00019897 | mRNA | downstream | 318301 | 2481905 ~ 2483959 (+) | True | AMCG00019897 |
| TU74243 | other | upstream | 1083872 | 1075504 ~ 1078063 (+) | False | AMCG00019884 |
| TU74166 | other | upstream | 1716405 | 441598 ~ 445530 (+) | True | G59305 |
| TU74774 | other | downstream | 1077835 | 3241439 ~ 3250062 (+) | False | AMCG00019934 |
| TU75012 | other | downstream | 2660209 | 4823813 ~ 4835797 (+) | False | AMCG00019967 |
| TU75242 | other | downstream | 3192168 | 5355772 ~ 5361863 (+) | True | G60137 |
| TU75235 | other | downstream | 3194860 | 5358464 ~ 5359365 (+) | True | G60132 |
| TU75390 | other | downstream | 4019108 | 6182712 ~ 6186084 (+) | False | AMCG00020000 |
