RNA id: TU74368


Basic Information

Item Value
RNA id TU74368
length 521
lncRNA type sense_over
GC content 0.43
exon number 2
gene id G59485
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 2195803 ~ 2221194 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTAAAACCCATCTGTTTGTGGACTTGCGTCTCGGCTCATTGCAGCTCTCTTTTCATTCAGATTTGGAGAGGCTCCCCTTGTGTTTCACTTCTGAAATGAGAGCAACTTTATCatgaagtttatttttacatttttctaaagTACTTCTCTTTGTCGTGTGGGAGAGTCACAGGCTCTTAACTCACACAGCTCCGGGACGGCAGGATTCACACAGGCATTGcgtttgattgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtatatatacactcacctaaaggattattaggaacacctgttcaatttctcattaatgcaattatctaaccaaccaatcacatggcagttgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaaggtgatttaagcaattttgagcgtggcatggttgttggtaccagacgggccggtctgagtatttcacaatctgttcagttactgg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74365 lncRNA downstream 3256 2192334 ~ 2192547 (-) True G59484
TU74290 lncRNA downstream 533624 1605102 ~ 1662179 (-) True G59414
TU74279 lncRNA downstream 701830 1493686 ~ 1493973 (-) True G59403
TU74272 lncRNA downstream 798578 1389345 ~ 1397225 (-) True G59396
TU74271 lncRNA downstream 848324 1347246 ~ 1347479 (-) True G59395
TU74466 lncRNA upstream 353610 2574804 ~ 2575670 (-) True G59556
TU74817 lncRNA upstream 1269524 3490718 ~ 3491049 (-) True G59810
TU74835 lncRNA upstream 1376011 3597205 ~ 3597760 (-) True G59825
TU74837 lncRNA upstream 1418844 3640038 ~ 3642114 (-) True G59827
TU74836 lncRNA upstream 1424845 3646039 ~ 3647334 (-) True G59826
AMCG00019890 mRNA downstream 10608 2160178 ~ 2185195 (-) True AMCG00019890
AMCG00019889 mRNA downstream 59864 2105830 ~ 2135939 (-) True AMCG00019889
AMCG00019888 mRNA downstream 275048 1913441 ~ 1920755 (-) True AMCG00019888
AMCG00019887 mRNA downstream 305934 1874560 ~ 1889869 (-) True AMCG00019887
AMCG00019883 mRNA downstream 1249914 944898 ~ 945889 (-) True AMCG00019883
AMCG00019892 mRNA upstream 5610 2226804 ~ 2247160 (-) True AMCG00019892
AMCG00019899 mRNA upstream 242442 2463636 ~ 2479709 (-) True AMCG00019899
AMCG00019913 mRNA upstream 468708 2689902 ~ 2690317 (-) True AMCG00019913
AMCG00019914 mRNA upstream 484135 2705329 ~ 2705778 (-) True AMCG00019914
AMCG00019912 mRNA upstream 488768 2709962 ~ 2742168 (-) True AMCG00019912
TU74284 other downstream 609803 1584919 ~ 1586000 (-) True G59408
TU74395 other upstream 103094 2324288 ~ 2327415 (-) True G59505
TU74434 other upstream 233717 2454911 ~ 2480799 (-) True G59530
TU74449 other upstream 273705 2494899 ~ 2507020 (-) True G59545
TU74667 other upstream 810662 3031856 ~ 3034335 (-) True G59712
TU74676 other upstream 886607 3107801 ~ 3111347 (-) True G59720

Expression Profile