RNA id: TU74449



Basic Information


Item Value
RNA id TU74449
length 416
RNA type TUCP
GC content 0.64
exon number 2
gene id G59545
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 2494899 ~ 2507020 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GCCGCAGTTCCAGGTGGCCTCGATGTAGTCTCGCTGCTCGTTCCACTGGAACCACATGCGGATGCCATCCTCGAGGAATGTGCTGATCAGACACAGGCGCGCCAAGTGGGGCAGGTACTGCTTCGTCACACGGAGGAACTGGTCCGCCACGTCCTCGGCGGTGCTCATCAGGTCGTTCTGCCCCATATCTCGGCTGGGCTGGCTCTCCTCTCTCGGGTCGTGTGGCGGCGGCGGGGCGGGCGCTGGAGGTCTCTTCTCCCGGGAGCTTCTCTTGGGTCTCTCGCTGTCTCCgtctatatctctctctctctctatctatcacaccccgctctctctctctctctctcgctgcctCTCCGACCGCCAGGAAAGGCCTCCTCCGCCCCACAATGCACCGCGCCGCCGCCCTGACGCGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU74368 lncRNA downstream 273705 2195803 ~ 2221194 (-) True G59485
TU74366 lncRNA downstream 289134 2195803 ~ 2205765 (-) False G59485
TU74365 lncRNA downstream 302352 2192334 ~ 2192547 (-) True G59484
TU74290 lncRNA downstream 832720 1605102 ~ 1662179 (-) True G59414
TU74279 lncRNA downstream 1000926 1493686 ~ 1493973 (-) True G59403
TU74466 lncRNA upstream 67784 2574804 ~ 2575670 (-) True G59556
TU74817 lncRNA upstream 983698 3490718 ~ 3491049 (-) True G59810
TU74835 lncRNA upstream 1090185 3597205 ~ 3597760 (-) True G59825
TU74837 lncRNA upstream 1133018 3640038 ~ 3642114 (-) True G59827
TU74836 lncRNA upstream 1139019 3646039 ~ 3647334 (-) True G59826
AMCG00019899 mRNA downstream 15190 2463636 ~ 2479709 (-) True AMCG00019899
AMCG00019892 mRNA downstream 247739 2226804 ~ 2247160 (-) True AMCG00019892
AMCG00019891 mRNA downstream 282126 2211677 ~ 2212773 (-) True AMCG00019891
AMCG00019890 mRNA downstream 309704 2160178 ~ 2185195 (-) True AMCG00019890
AMCG00019889 mRNA downstream 358960 2105830 ~ 2135939 (-) True AMCG00019889
AMCG00019913 mRNA upstream 182882 2689902 ~ 2690317 (-) True AMCG00019913
AMCG00019914 mRNA upstream 198309 2705329 ~ 2705778 (-) True AMCG00019914
AMCG00019912 mRNA upstream 202942 2709962 ~ 2742168 (-) True AMCG00019912
AMCG00019911 mRNA upstream 265549 2772569 ~ 2781304 (-) True AMCG00019911
AMCG00019919 mRNA upstream 304331 2811351 ~ 2825112 (-) True AMCG00019919
TU74434 other downstream 14100 2454911 ~ 2480799 (-) True G59530
TU74395 other downstream 167484 2324288 ~ 2327415 (-) True G59505
TU74284 other downstream 908899 1584919 ~ 1586000 (-) True G59408
TU74667 other upstream 524836 3031856 ~ 3034335 (-) True G59712
TU74676 other upstream 600781 3107801 ~ 3111347 (-) True G59720
TU74745 other upstream 659217 3166237 ~ 3183066 (-) False AMCG00019942
TU74744 other upstream 671021 3178041 ~ 3183066 (-) True AMCG00019942
TU74813 other upstream 972762 3479782 ~ 3480109 (-) True G59806

Expression Profile