RNA id: TU74468



Basic Information


Item Value
RNA id TU74468
length 400
lncRNA type inter_gene
GC content 0.47
exon number 2
gene id G59557
representative False

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 2583694 ~ 2634130 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


aagatatcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaatgtcctactgagagactgaggacctgaaccttttcacctggaacagaggagactacgtggggacttgatccaagtcttcaaaatcatgaaaggcatcgaccacatcaaaccagaggagcttttccagatcagcagggacacacgcacccggggacacaaatggaaattgggcttcaaggcattcaagacagaaaacaggagacacttcttcacacagagaggcgtcacaatctgaacaaactccccagcgatgtggctgaagagacaatttgggaacattcaaaaacagactggataggatccttgatcactcagttattaatggacaccaaac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU74348 lncRNA upstream 402625 2180603 ~ 2181069 (+) True G59467
TU74341 lncRNA upstream 416254 2164521 ~ 2167440 (+) True G59460
TU74340 lncRNA upstream 420090 2161935 ~ 2163604 (+) True G59459
TU74319 lncRNA upstream 548900 2034561 ~ 2034794 (+) True G59440
TU74302 lncRNA upstream 786553 1796926 ~ 1797141 (+) True G59425
TU74500 lncRNA downstream 127459 2715528 ~ 2716915 (+) True G59578
TU74548 lncRNA downstream 199841 2787910 ~ 2788239 (+) True G59625
TU74563 lncRNA downstream 237522 2825591 ~ 2826637 (+) True G59638
TU74574 lncRNA downstream 295645 2883714 ~ 2885416 (+) True G59646
TU74584 lncRNA downstream 374439 2962508 ~ 2969578 (+) False AMCG00019920
AMCG00019902 mRNA upstream 11977 2567816 ~ 2571717 (+) True AMCG00019902
AMCG00019903 mRNA upstream 19296 2562954 ~ 2564398 (+) True AMCG00019903
AMCG00019901 mRNA upstream 38945 2522528 ~ 2544749 (+) True AMCG00019901
AMCG00019900 mRNA upstream 74037 2497948 ~ 2509657 (+) True AMCG00019900
AMCG00019895 mRNA upstream 94750 2484957 ~ 2488944 (+) True AMCG00019895
AMCG00019909 mRNA downstream 23625 2611694 ~ 2617930 (+) True AMCG00019909
AMCG00019908 mRNA downstream 32901 2620970 ~ 2631665 (+) True AMCG00019908
AMCG00019906 mRNA downstream 44176 2632245 ~ 2636245 (+) True AMCG00019906
AMCG00019905 mRNA downstream 62868 2650937 ~ 2656033 (+) True AMCG00019905
AMCG00019904 mRNA downstream 69976 2658045 ~ 2663160 (+) True AMCG00019904
TU74243 other upstream 1505631 1075504 ~ 1078063 (+) False AMCG00019884
TU74166 other upstream 2138164 441598 ~ 445530 (+) True G59305
TU74774 other downstream 653370 3241439 ~ 3250062 (+) False AMCG00019934
TU75012 other downstream 2235744 4823813 ~ 4835797 (+) False AMCG00019967
TU75242 other downstream 2767703 5355772 ~ 5361863 (+) True G60137
TU75235 other downstream 2770395 5358464 ~ 5359365 (+) True G60132
TU75390 other downstream 3594643 6182712 ~ 6186084 (+) False AMCG00020000

Expression Profile