RNA id: TU74983


Basic Information

Item Value
RNA id TU74983
length 389
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G59940
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 4671780 ~ 4672168 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TTGTTCTGTGGCATGAGTGGAGGGCTGGCTGGGGACGCTCCACTGGGACGTTTTGTTGTACAGGCGGAGGTCCTGCAGGCTGGTCACAAGCACGGCCAGCTTCTGCTTCTGCTGATTGATGATGTCAAGGTGATTGGCCAGAGCACTGAACAGCGCTTCCCTCTCCGGGACGATCAGGTGCcttggaagagaagaaaaaaataacaaatgaaaacagagatggagacagaaAATCAGGAAAGCAGACTTCTGAGACCATTAGCAGCACTTTCAGCACAGTCTCTtacttctttttcttcttcttctccagaTGTTTCTCCCACTCCAGATCAAGCACATCATTTACATCTTCCACTGCAAACTTGATGTACTGGTACAACCTACGGATT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74982 lncRNA downstream 2622 4668958 ~ 4669158 (-) True G59939
TU74981 lncRNA downstream 2911 4668350 ~ 4668869 (-) True G59938
TU74974 lncRNA downstream 20778 4648022 ~ 4651002 (-) True G59932
TU74954 lncRNA downstream 49423 4621977 ~ 4622357 (-) True G59922
TU74938 lncRNA downstream 362835 4308676 ~ 4308945 (-) True G59907
TU74984 lncRNA upstream 1116 4673284 ~ 4673609 (-) True G59941
TU75003 lncRNA upstream 78319 4750487 ~ 4755192 (-) True G59958
TU75008 lncRNA upstream 124558 4796726 ~ 4800269 (-) True G59963
TU75029 lncRNA upstream 172629 4844797 ~ 4848796 (-) True G59979
TU75100 lncRNA upstream 313513 4985681 ~ 4989055 (-) True G60034
AMCG00019960 mRNA downstream 43911 4622417 ~ 4627869 (-) True AMCG00019960
AMCG00019956 mRNA downstream 408203 4255272 ~ 4263577 (-) True AMCG00019956
AMCG00019955 mRNA downstream 476600 4185305 ~ 4195180 (-) True AMCG00019955
AMCG00019954 mRNA downstream 499171 4164799 ~ 4172609 (-) True AMCG00019954
AMCG00019953 mRNA downstream 507498 4142990 ~ 4164282 (-) True AMCG00019953
AMCG00019964 mRNA upstream 83356 4755524 ~ 4766859 (-) True AMCG00019964
AMCG00019968 mRNA upstream 203418 4875586 ~ 4886898 (-) True AMCG00019968
AMCG00019970 mRNA upstream 226772 4898940 ~ 4908555 (-) True AMCG00019970
AMCG00019972 mRNA upstream 258335 4930503 ~ 4940565 (-) True AMCG00019972
AMCG00019971 mRNA upstream 297022 4969190 ~ 4983211 (-) True AMCG00019971
TU74813 other downstream 1191671 3479782 ~ 3480109 (-) True G59806
TU74745 other downstream 1488714 3166237 ~ 3183066 (-) False AMCG00019942
TU74744 other downstream 1488714 3178041 ~ 3183066 (-) True AMCG00019942
TU74676 other downstream 1560433 3107801 ~ 3111347 (-) True G59720
TU74667 other downstream 1637445 3031856 ~ 3034335 (-) True G59712
TU75113 other upstream 340276 5012444 ~ 5061277 (-) True AMCG00019976
TU75216 other upstream 591746 5263914 ~ 5265925 (-) True G60118
TU75221 other upstream 604494 5276662 ~ 5278291 (-) True AMCG00019993
TU75228 other upstream 619422 5291590 ~ 5292673 (-) False AMCG00019992
TU75483 other upstream 1778454 6450622 ~ 6453598 (-) False AMCG00020017

Expression Profile