RNA id: TU75187



Basic Information


Item Value
RNA id TU75187
length 222
lncRNA type inter_gene
GC content 0.63
exon number 1
gene id G60101
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 5165267 ~ 5165488 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GGAAAGGGGAGCAGTGCAGGGCATGGATGGGGCCACAGTGAGGCGAGAAGGAGAACTGTACTGGGGCTCTCAGGACCACACTCTCACTGTCCGAGGCCACGGCCGCCATCTTCTGCTGGGAGAAGGAGCACTTGAGCACCAGCCCCCCCTCTGAGCCCACCAGGAAAACATCCGAGtcccagggagagagagccaGAGACGTCACCCCCACCGCACTGTTCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU75186 lncRNA downstream 1272 5163764 ~ 5163995 (-) True G60100
TU75185 lncRNA downstream 2746 5162006 ~ 5162521 (-) True G60099
TU75172 lncRNA downstream 4570 5118351 ~ 5160697 (-) True G60089
TU75169 lncRNA downstream 8074 5153058 ~ 5157193 (-) False G60088
TU75166 lncRNA downstream 8074 5155008 ~ 5157193 (-) True G60088
TU75188 lncRNA upstream 871 5166359 ~ 5167290 (-) True G60102
TU75287 lncRNA upstream 305831 5471319 ~ 5523619 (-) True G60179
TU75342 lncRNA upstream 825457 5990945 ~ 5991184 (-) True G60230
TU75343 lncRNA upstream 829981 5995469 ~ 5995688 (-) True G60231
TU75347 lncRNA upstream 871077 6036565 ~ 6040665 (-) True G60235
AMCG00019982 mRNA downstream 5947 5158359 ~ 5159320 (-) True AMCG00019982
AMCG00019983 mRNA downstream 12214 5132046 ~ 5153053 (-) True AMCG00019983
AMCG00019974 mRNA downstream 96228 5065640 ~ 5069039 (-) True AMCG00019974
AMCG00019976 mRNA downstream 103755 5060491 ~ 5061512 (-) False AMCG00019976
AMCG00019975 mRNA downstream 159284 4992636 ~ 5005983 (-) True AMCG00019975
AMCG00019985 mRNA upstream 1878 5167366 ~ 5206880 (-) True AMCG00019985
AMCG00019984 mRNA upstream 42285 5207773 ~ 5230138 (-) True AMCG00019984
AMCG00019987 mRNA upstream 68742 5234230 ~ 5234454 (-) True AMCG00019987
AMCG00019993 mRNA upstream 111176 5276664 ~ 5277926 (-) False AMCG00019993
AMCG00019992 mRNA upstream 126104 5291592 ~ 5292616 (-) True AMCG00019992
TU75113 other downstream 103990 5012444 ~ 5061277 (-) True AMCG00019976
TU74813 other downstream 1685158 3479782 ~ 3480109 (-) True G59806
TU74745 other downstream 1982201 3166237 ~ 3183066 (-) False AMCG00019942
TU74744 other downstream 1982201 3178041 ~ 3183066 (-) True AMCG00019942
TU74676 other downstream 2053920 3107801 ~ 3111347 (-) True G59720
TU75216 other upstream 98426 5263914 ~ 5265925 (-) True G60118
TU75221 other upstream 111174 5276662 ~ 5278291 (-) True AMCG00019993
TU75228 other upstream 126102 5291590 ~ 5292673 (-) False AMCG00019992
TU75483 other upstream 1285134 6450622 ~ 6453598 (-) False AMCG00020017
TU75489 other upstream 1298060 6463548 ~ 6466586 (-) False G60348

Expression Profile