RNA id: TU75216


Basic Information

Item Value
RNA id TU75216
length 424
RNA type TUCP
GC content 0.45
exon number 2
gene id G60118
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 5263914 ~ 5265925 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ctTTGACACCAGCTGATGATGAAGATCATCGcactgctcctgctgctgcaaCTCCTGGGCTGCTGGTCCGACACACTGCCCCAAGAAGAAAGTGTACACAGAGAGCTCAAGGAAACCAAGGATGTCCCAGCATACACCAGTGGACAGGAGATCTGTCCAGCTAATATATGTGCTGAACTGAGAGAGCTGAGAGCCATGATGCAGGAAATGAAGAGATTGGTCCAAGGCATACCAAAGGTAGCGTTCACTGCTACTCTATATGTCTCAGATACTGGTGAATCACAAACTGGACCATTCAATACTGAAATCACCCTGGTCTACAAAAAAGTCTACACAAACATTGGCAACGCTTACAACCCAACTACAGGTATGAGAAGTTTGAGTTTCATTTTTCTgttatgcaagaactatttttTCTGCCTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU75188 lncRNA downstream 96624 5166359 ~ 5167290 (-) True G60102
TU75187 lncRNA downstream 98426 5165267 ~ 5165488 (-) True G60101
TU75186 lncRNA downstream 99919 5163764 ~ 5163995 (-) True G60100
TU75185 lncRNA downstream 101393 5162006 ~ 5162521 (-) True G60099
TU75172 lncRNA downstream 103217 5118351 ~ 5160697 (-) True G60089
TU75287 lncRNA upstream 205394 5471319 ~ 5523619 (-) True G60179
TU75342 lncRNA upstream 725020 5990945 ~ 5991184 (-) True G60230
TU75343 lncRNA upstream 729544 5995469 ~ 5995688 (-) True G60231
TU75347 lncRNA upstream 770640 6036565 ~ 6040665 (-) True G60235
TU75349 lncRNA upstream 789624 6055549 ~ 6055822 (-) True G60237
AMCG00019987 mRNA downstream 29460 5234230 ~ 5234454 (-) True AMCG00019987
AMCG00019984 mRNA downstream 33776 5207773 ~ 5230138 (-) True AMCG00019984
AMCG00019985 mRNA downstream 57034 5167366 ~ 5206880 (-) True AMCG00019985
AMCG00019982 mRNA downstream 104594 5158359 ~ 5159320 (-) True AMCG00019982
AMCG00019983 mRNA downstream 110861 5132046 ~ 5153053 (-) True AMCG00019983
AMCG00019993 mRNA upstream 10739 5276664 ~ 5277926 (-) False AMCG00019993
AMCG00019992 mRNA upstream 25667 5291592 ~ 5292616 (-) True AMCG00019992
AMCG00019989 mRNA upstream 31528 5297453 ~ 5301869 (-) True AMCG00019989
AMCG00019990 mRNA upstream 109941 5375866 ~ 5380964 (-) True AMCG00019990
AMCG00019994 mRNA upstream 302593 5568518 ~ 5574686 (-) True AMCG00019994
TU75113 other downstream 202637 5012444 ~ 5061277 (-) True AMCG00019976
TU74813 other downstream 1783805 3479782 ~ 3480109 (-) True G59806
TU74745 other downstream 2080848 3166237 ~ 3183066 (-) False AMCG00019942
TU74744 other downstream 2080848 3178041 ~ 3183066 (-) True AMCG00019942
TU74676 other downstream 2152567 3107801 ~ 3111347 (-) True G59720
TU75221 other upstream 10737 5276662 ~ 5278291 (-) True AMCG00019993
TU75228 other upstream 25665 5291590 ~ 5292673 (-) False AMCG00019992
TU75483 other upstream 1184697 6450622 ~ 6453598 (-) False AMCG00020017
TU75489 other upstream 1197623 6463548 ~ 6466586 (-) False G60348
TU75492 other upstream 1197623 6463548 ~ 6466586 (-) False G60348

Expression Profile