RNA id: TU75501


Basic Information

Item Value
RNA id TU75501
length 307
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G60356
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 6487309 ~ 6489377 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AGCAGAAGAAGTCTTCAGACAAGAGGGCTCTTTCACCGTGCAGGACAAGTGAGATCAGGGTGCTGGGGGGCCGACACACCCAGAGGGGAGCCGATTCAGCTACTGACACACAGCCTCAGTGAAAGCCAAGAAAATGTCAGAGGAGATGCATGCCAACCTCTGGACATACATGTGACTGATTCCACggctccaaaggaggaagatgATGATGACACCAGATCAGGGACTCTACATTTCTATCTGCCTTCACCACAATGTGAGGaacaagaggaggaggaagagaaaagagACACAAGGTATTGCAATG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU75488 lncRNA downstream 20723 6463548 ~ 6466586 (-) False G60348
TU75491 lncRNA downstream 20723 6463548 ~ 6466586 (-) True G60348
TU75473 lncRNA downstream 42576 6443275 ~ 6444733 (-) True G60345
TU75437 lncRNA downstream 128370 6300656 ~ 6358939 (-) True G60317
TU75431 lncRNA downstream 211277 6274269 ~ 6276032 (-) True G60311
TU75527 lncRNA upstream 189801 6679178 ~ 6695776 (-) True G60377
TU75537 lncRNA upstream 308532 6797909 ~ 6800750 (-) True G60387
TU75725 lncRNA upstream 1083220 7572597 ~ 7572831 (-) True G60540
TU75818 lncRNA upstream 1363624 7853001 ~ 7854373 (-) True G60610
TU75879 lncRNA upstream 1555232 8044609 ~ 8047241 (-) True G60656
AMCG00020019 mRNA downstream 16843 6467271 ~ 6470466 (-) False AMCG00020019
AMCG00020017 mRNA downstream 25881 6450627 ~ 6461428 (-) True AMCG00020017
AMCG00020011 mRNA downstream 142617 6342787 ~ 6344692 (-) True AMCG00020011
AMCG00020013 mRNA downstream 153942 6329008 ~ 6333367 (-) True AMCG00020013
AMCG00020012 mRNA downstream 158679 6307533 ~ 6328630 (-) True AMCG00020012
AMCG00020018 mRNA upstream 79678 6569055 ~ 6591103 (-) True AMCG00020018
AMCG00020024 mRNA upstream 380196 6869573 ~ 6896989 (-) True AMCG00020024
AMCG00020025 mRNA upstream 409507 6898884 ~ 6923473 (-) True AMCG00020025
AMCG00020026 mRNA upstream 497159 6986536 ~ 7008056 (-) True AMCG00020026
AMCG00020027 mRNA upstream 623436 7112813 ~ 7126623 (-) True AMCG00020027
TU75494 other downstream 15875 6468288 ~ 6471434 (-) True AMCG00020019
TU75489 other downstream 20723 6463548 ~ 6466586 (-) False G60348
TU75492 other downstream 20723 6463548 ~ 6466586 (-) False G60348
TU75483 other downstream 33711 6450622 ~ 6453598 (-) False AMCG00020017
TU75228 other downstream 1194636 5291590 ~ 5292673 (-) False AMCG00019992
TU75693 other upstream 951426 7440803 ~ 7562592 (-) True G60516
TU75977 other upstream 2324882 8814259 ~ 8828109 (-) True AMCG00020066
TU75987 other upstream 2349834 8839211 ~ 8839945 (-) True G60746
TU76536 other upstream 4266091 10755468 ~ 10756419 (-) True G61170
TU76663 other upstream 5206314 11695691 ~ 11701645 (-) True G61269

Expression Profile