RNA id: TU75725


Basic Information

Item Value
RNA id TU75725
length 235
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G60540
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 7572597 ~ 7572831 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTTATCACGCACAGGGACAGGAGCACTTCCTTGTGTCTTTGCGTCGGTCCTGGACGAGCTGCTCCTTTAAGCAGCAGAGCCCGCTCGGCTTGTGGGATGGTTCAGTTTCAAGCTGGAGGGAGAGGAAGTTGCGCAGCCCGGATAAGGCATTGAGATAAAAGCTCATATAGTGATTGAAAGTGAAGGCAAAAAGGATTTAGCATTAGTATTaacttggagagagagagagagagag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU75537 lncRNA downstream 771847 6797909 ~ 6800750 (-) True G60387
TU75527 lncRNA downstream 876821 6679178 ~ 6695776 (-) True G60377
TU75501 lncRNA downstream 1083220 6487309 ~ 6489377 (-) True G60356
TU75488 lncRNA downstream 1106011 6463548 ~ 6466586 (-) False G60348
TU75491 lncRNA downstream 1106011 6463548 ~ 6466586 (-) True G60348
TU75818 lncRNA upstream 280170 7853001 ~ 7854373 (-) True G60610
TU75879 lncRNA upstream 471778 8044609 ~ 8047241 (-) True G60656
TU75964 lncRNA upstream 1221137 8793968 ~ 8796315 (-) True G60723
TU75966 lncRNA upstream 1226133 8798964 ~ 8799167 (-) True G60725
TU75971 lncRNA upstream 1234189 8807020 ~ 8809893 (-) True G60730
AMCG00020038 mRNA downstream 2992 7537932 ~ 7569605 (-) True AMCG00020038
AMCG00020039 mRNA downstream 56906 7507361 ~ 7515691 (-) True AMCG00020039
AMCG00020033 mRNA downstream 119522 7445481 ~ 7453075 (-) True AMCG00020033
AMCG00020034 mRNA downstream 128103 7429012 ~ 7444494 (-) True AMCG00020034
AMCG00020035 mRNA downstream 186835 7364054 ~ 7385762 (-) True AMCG00020035
AMCG00020043 mRNA upstream 194094 7766925 ~ 7785992 (-) True AMCG00020043
AMCG00020051 mRNA upstream 219467 7792298 ~ 7797939 (-) True AMCG00020051
AMCG00020050 mRNA upstream 227091 7799922 ~ 7810406 (-) True AMCG00020050
AMCG00020054 mRNA upstream 308989 7881820 ~ 7927867 (-) True AMCG00020054
AMCG00020055 mRNA upstream 480988 8053819 ~ 8071930 (-) True AMCG00020055
TU75693 other downstream 10005 7440803 ~ 7562592 (-) True G60516
TU75494 other downstream 1101163 6468288 ~ 6471434 (-) True AMCG00020019
TU75489 other downstream 1106011 6463548 ~ 6466586 (-) False G60348
TU75492 other downstream 1106011 6463548 ~ 6466586 (-) False G60348
TU75483 other downstream 1118999 6450622 ~ 6453598 (-) False AMCG00020017
TU75977 other upstream 1241428 8814259 ~ 8828109 (-) True AMCG00020066
TU75987 other upstream 1266380 8839211 ~ 8839945 (-) True G60746
TU76536 other upstream 3182637 10755468 ~ 10756419 (-) True G61170
TU76663 other upstream 4122860 11695691 ~ 11701645 (-) True G61269
TU76919 other upstream 4911538 12484369 ~ 12486334 (-) False AMCG00020180

Expression Profile