RNA id: TU76576


Basic Information

Item Value
RNA id TU76576
length 299
lncRNA type inter_gene
GC content 0.58
exon number 1
gene id G61200
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 10961136 ~ 10961434 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTCACTATCCACAGTTGTCTTGGGCTTTGGCTTCATCTTTGTCTTCGGAAAAGCGCCGTCCTCCAGGAAGCTGCGGTCCAACCCCTCGTCCGGCACAAAGTCGTCCACGCTCTGCACCTTCACGGGGCGCTCAGTAGCGGCGGGGGCTGTGGAGTCTGAGGACATGAACATCACGCAAGCATCAGAGTCCACTGCCCTCGTGGGACTACAACCCCAAAGCCCCGGCGGGAGGGGCAGGTGCGACACCCAGAAAAGATAATCTGGAGATGTGCAGCACTTCAAGAGGATTATTCTCTTTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU76500 lncRNA downstream 260253 10698129 ~ 10700883 (-) True G61137
TU76499 lncRNA downstream 263037 10696618 ~ 10698099 (-) True G61136
TU76445 lncRNA downstream 453499 10506408 ~ 10507637 (-) True G61098
TU76378 lncRNA downstream 755458 10203839 ~ 10205678 (-) True G61052
TU76350 lncRNA downstream 870050 10085913 ~ 10091086 (-) True G61027
TU76577 lncRNA upstream 877 10962311 ~ 10962510 (-) True G61201
TU76579 lncRNA upstream 5746 10967180 ~ 10969599 (-) True G61203
TU76582 lncRNA upstream 31465 10992899 ~ 10993246 (-) True G61206
TU76670 lncRNA upstream 752067 11713501 ~ 11723414 (-) True G61273
TU76703 lncRNA upstream 964130 11925564 ~ 11927864 (-) True G61302
AMCG00020135 mRNA downstream 17372 10934775 ~ 10943764 (-) True AMCG00020135
AMCG00020136 mRNA downstream 144211 10783364 ~ 10816925 (-) True AMCG00020136
AMCG00020133 mRNA downstream 181749 10773696 ~ 10779387 (-) True AMCG00020133
AMCG00020132 mRNA downstream 233605 10704975 ~ 10727531 (-) True AMCG00020132
AMCG00020124 mRNA downstream 313297 10631292 ~ 10647839 (-) True AMCG00020124
AMCG00020140 mRNA upstream 137040 11098474 ~ 11109758 (-) True AMCG00020140
AMCG00020141 mRNA upstream 183261 11144695 ~ 11162222 (-) True AMCG00020141
AMCG00020139 mRNA upstream 219952 11181386 ~ 11187648 (-) True AMCG00020139
AMCG00020151 mRNA upstream 857291 11818725 ~ 11843715 (-) True AMCG00020151
AMCG00020155 mRNA upstream 998183 11959617 ~ 11960888 (-) True AMCG00020155
TU76536 other downstream 204717 10755468 ~ 10756419 (-) True G61170
TU75987 other downstream 2121191 8839211 ~ 8839945 (-) True G60746
TU75977 other downstream 2133027 8814259 ~ 8828109 (-) True AMCG00020066
TU75693 other downstream 3398544 7440803 ~ 7562592 (-) True G60516
TU75494 other downstream 4489702 6468288 ~ 6471434 (-) True AMCG00020019
TU76663 other upstream 734257 11695691 ~ 11701645 (-) True G61269
TU76919 other upstream 1522935 12484369 ~ 12486334 (-) False AMCG00020180
TU76921 other upstream 1522935 12484369 ~ 12496740 (-) False AMCG00020180
TU76915 other upstream 1529264 12490698 ~ 12504677 (-) False AMCG00020180
TU76916 other upstream 1529264 12490698 ~ 12496740 (-) False AMCG00020180

Expression Profile