RNA id: TU77034


Basic Information

Item Value
RNA id TU77034
length 719
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G61558
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 12804670 ~ 12805433 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AAAACGTTGTTGTAAGGCCGTGCGAAAACACGTTCGTTGAAATAATAACGCGAATATGTTCAGGAAGGGTGTCTCTAATACAATCAATTTTAGAATATGAAATTAATCCGGTTTTCCTTAGTTTATATACATAGAGAAAAAGCGCCACTTGAACGCTTtacaatcccacaatgcaccgctTCGGCTAAGACGGAAGTTTCCCTGTGAAATAGGCGGGTTGATGGTCTGGTGCCGCgctgtttgaatGTGTGTTTAGGGAGGACatgtttttaacattatatttgaaCATGTGTGTTTAGGGAGGAcatgtttttatcattatatttgaACATGTGTGTTTAGGGAGGAcatgtttttatcattatatttgaACATGTGTGTTTAGGGAGGACatgtttttaacattatatttgaaCATGTGTGTTTAGGGAGGACatgtttttaacattatatttgaaCATGTGTGTTTAGGGAGGACATGTTCTTGAACattgagtatgtgtgtgtattattatctTCCAAGCTTGTTCCAGTTTTCGCTAGATGGTAGGTAGGGACATTCAGAATctcattaatgaattaataataatgaagaagaaaTGGGGATGTTTGTGGGTTAGTGAAATGCATGCAGTGTACTGCATCTACATACATCGCGCAGCAGCACAACGATGTTGGAAGTAAAGCGGTTTCAGATACAGTAGGTGGCGACATTGAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU77020 lncRNA downstream 61233 12719367 ~ 12743437 (-) True G61550
TU76944 lncRNA downstream 220922 12578671 ~ 12583748 (-) True G61488
TU76926 lncRNA downstream 305244 12493801 ~ 12499426 (-) True G61477
TU76910 lncRNA downstream 352877 12430802 ~ 12451793 (-) True G61470
TU76846 lncRNA downstream 409642 12394285 ~ 12395028 (-) True G61424
TU77095 lncRNA upstream 201989 13007422 ~ 13007666 (-) True G61593
TU77227 lncRNA upstream 531583 13337016 ~ 13338101 (-) True G61696
TU77271 lncRNA upstream 641569 13447002 ~ 13450062 (-) True G61729
TU77364 lncRNA upstream 772976 13578409 ~ 13653379 (-) True G61803
TU77451 lncRNA upstream 945651 13751084 ~ 13751298 (-) True G61872
AMCG00020193 mRNA downstream 14110 12782323 ~ 12790560 (-) True AMCG00020193
AMCG00020189 mRNA downstream 28254 12766665 ~ 12776416 (-) True AMCG00020189
AMCG00020190 mRNA downstream 38286 12762409 ~ 12766384 (-) True AMCG00020190
AMCG00020188 mRNA downstream 45444 12753857 ~ 12759226 (-) True AMCG00020188
AMCG00020183 mRNA downstream 140158 12658313 ~ 12664512 (-) True AMCG00020183
AMCG00020196 mRNA upstream 4041 12809474 ~ 12810528 (-) True AMCG00020196
AMCG00020195 mRNA upstream 5230 12810663 ~ 12813210 (-) True AMCG00020195
AMCG00020194 mRNA upstream 13497 12818930 ~ 12827022 (-) True AMCG00020194
AMCG00020198 mRNA upstream 75231 12880664 ~ 12887861 (-) True AMCG00020198
AMCG00020197 mRNA upstream 84208 12889641 ~ 12898257 (-) True AMCG00020197
TU76920 other downstream 294733 12500424 ~ 12509937 (-) False AMCG00020180
TU76915 other downstream 299993 12490698 ~ 12504677 (-) False AMCG00020180
TU77089 other upstream 192405 12997838 ~ 12998223 (-) True G61589
TU77151 other upstream 416167 13221600 ~ 13224510 (-) True AMCG00020212
TU77373 other upstream 790085 13595518 ~ 13596917 (-) True AMCG00020230
TU77394 other upstream 858654 13664087 ~ 13665585 (-) False AMCG00020229
TU77536 other upstream 999587 13805020 ~ 13808333 (-) True AMCG00020252

Expression Profile