RNA id: TU77095



Basic Information


Item Value
RNA id TU77095
length 207
lncRNA type intronic
GC content 0.46
exon number 2
gene id G61593
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 13007422 ~ 13007666 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TACACTCTCACTACACTGTCAGTACACTACACTGTCACTACACTGTCAGTACACTACACTCTCACTACACTGTCAGTACACTACACTCTCactGCACTGTCAGTACACTACACTCTCACTACACTGCCAGTACACTACACTGTCAGTACACTACACTCTCACTGCACTGTCAGTACACTACACTCTCACTACACTCTCACTACACCA

Function


GO: NA

KEGG:

id description
ko04913 Ovarian steroidogenesis

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU77034 lncRNA downstream 201989 12804670 ~ 12805433 (-) True G61558
TU77020 lncRNA downstream 263985 12719367 ~ 12743437 (-) True G61550
TU76944 lncRNA downstream 423674 12578671 ~ 12583748 (-) True G61488
TU76926 lncRNA downstream 507996 12493801 ~ 12499426 (-) True G61477
TU76910 lncRNA downstream 555629 12430802 ~ 12451793 (-) True G61470
TU77227 lncRNA upstream 329350 13337016 ~ 13338101 (-) True G61696
TU77271 lncRNA upstream 439336 13447002 ~ 13450062 (-) True G61729
TU77364 lncRNA upstream 570743 13578409 ~ 13653379 (-) True G61803
TU77451 lncRNA upstream 743418 13751084 ~ 13751298 (-) True G61872
TU77532 lncRNA upstream 781725 13789391 ~ 13792931 (-) True G61920
AMCG00020197 mRNA downstream 109165 12889641 ~ 12898257 (-) True AMCG00020197
AMCG00020198 mRNA downstream 119561 12880664 ~ 12887861 (-) True AMCG00020198
AMCG00020194 mRNA downstream 180400 12818930 ~ 12827022 (-) True AMCG00020194
AMCG00020195 mRNA downstream 194212 12810663 ~ 12813210 (-) True AMCG00020195
AMCG00020196 mRNA downstream 196894 12809474 ~ 12810528 (-) True AMCG00020196
AMCG00020201 mRNA upstream 22003 13029669 ~ 13033709 (-) True AMCG00020201
AMCG00020202 mRNA upstream 26423 13034089 ~ 13038065 (-) True AMCG00020202
AMCG00020199 mRNA upstream 68052 13075718 ~ 13079535 (-) True AMCG00020199
AMCG00020203 mRNA upstream 75963 13083629 ~ 13083952 (-) True AMCG00020203
AMCG00020204 mRNA upstream 84897 13092563 ~ 13110839 (-) True AMCG00020204
TU77089 other downstream 9199 12997838 ~ 12998223 (-) True G61589
TU76920 other downstream 497485 12500424 ~ 12509937 (-) False AMCG00020180
TU76915 other downstream 502745 12490698 ~ 12504677 (-) False AMCG00020180
TU77151 other upstream 213934 13221600 ~ 13224510 (-) True AMCG00020212
TU77373 other upstream 587852 13595518 ~ 13596917 (-) True AMCG00020230
TU77394 other upstream 656421 13664087 ~ 13665585 (-) False AMCG00020229
TU77536 other upstream 797354 13805020 ~ 13808333 (-) True AMCG00020252
TU77538 other upstream 797354 13805020 ~ 13808333 (-) False AMCG00020252

Expression Profile