RNA id: TU77815


Basic Information

Item Value
RNA id TU77815
length 359
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G62143
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 14703511 ~ 14767563 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gtgtgtgtgtgactgtgtgtgtgtgtgtctgtgagtgtgtgtgtgtgtgtgtgagtgtctgtgagtgtgtgtgtgtgtgtgtgagtgtgtgtgtgagtgtgtgtgactgtgtgtgtgtgtgtgactgtgtgtgtgtgtgtctgtgagtgtgtgagtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgagtgtgtgtgtgagtgtgtgtgtgtgagtgtgtctgtgtatttgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagagagagagagagagagagagagagagagagagagag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU77717 lncRNA downstream 302209 14345297 ~ 14401302 (-) False G62066
TU77716 lncRNA downstream 302209 14353490 ~ 14401302 (-) True G62066
TU77567 lncRNA downstream 789345 13913172 ~ 13914166 (-) True G61943
TU77551 lncRNA downstream 875246 13824689 ~ 13828265 (-) False AMCG00020249
TU77549 lncRNA downstream 879971 13821748 ~ 13823540 (-) True G61927
TU77869 lncRNA upstream 264572 15032135 ~ 15034076 (-) True G62191
TU77990 lncRNA upstream 655592 15423155 ~ 15423574 (-) True G62283
TU78228 lncRNA upstream 1712967 16480530 ~ 16480990 (-) True G62475
TU78317 lncRNA upstream 1848760 16616323 ~ 16617421 (-) False AMCG00020336
TU78318 lncRNA upstream 1848831 16616394 ~ 16617421 (-) False AMCG00020336
AMCG00020289 mRNA downstream 64142 14634566 ~ 14639369 (-) True AMCG00020289
AMCG00020286 mRNA downstream 124673 14564774 ~ 14578838 (-) True AMCG00020286
AMCG00020287 mRNA downstream 138870 14554864 ~ 14564641 (-) True AMCG00020287
AMCG00020288 mRNA downstream 157568 14497234 ~ 14545943 (-) True AMCG00020288
AMCG00020285 mRNA downstream 218534 14462413 ~ 14484977 (-) True AMCG00020285
AMCG00020290 mRNA upstream 3421 14770984 ~ 14775208 (-) True AMCG00020290
AMCG00020294 mRNA upstream 347344 15114907 ~ 15128403 (-) True AMCG00020294
AMCG00020293 mRNA upstream 363096 15130659 ~ 15145083 (-) True AMCG00020293
AMCG00020300 mRNA upstream 478710 15246273 ~ 15265762 (-) True AMCG00020300
AMCG00020302 mRNA upstream 501506 15269069 ~ 15269426 (-) True AMCG00020302
TU77709 other downstream 371104 14330522 ~ 14332407 (-) True G62061
TU77648 other downstream 571942 14129678 ~ 14131569 (-) True G62011
TU77536 other downstream 895178 13805020 ~ 13808333 (-) True AMCG00020252
TU77538 other downstream 895178 13805020 ~ 13808333 (-) False AMCG00020252
TU77394 other downstream 1037926 13664087 ~ 13665585 (-) False AMCG00020229
TU78130 other upstream 1331337 16098900 ~ 16102739 (-) False AMCG00020316
TU78131 other upstream 1331337 16098900 ~ 16102739 (-) True AMCG00020316
TU78145 other upstream 1351426 16118989 ~ 16120153 (-) True G62409
TU78153 other upstream 1485225 16252788 ~ 16255119 (-) True G62415
TU78161 other upstream 1504888 16272451 ~ 16275573 (-) True G62421

Expression Profile