RNA id: TU78763



Basic Information


Item Value
RNA id TU78763
length 328
lncRNA type inter_gene
GC content 0.54
exon number 2
gene id G62916
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 17987848 ~ 18032139 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTGTAGCCCAGCACCTGTGTGTCCTGAGTGGTGGCGTGGAAGACACTGAGAGGGACGACGCTTCCATAGCGCTGCACTTCATGGATCACAGCTTGGACATAGGGCATGCTGTGCCTGTCCTCATAGCagacctgctctctctctccaaggaCAGTGTCGATCTCCTGGTGGCACCGTGCTGAGGAGAGGAGGGCCCACTGTCAGCAGCTCAGCACACTAGACACCTCTACAGAGTTGCCAATTATCCATGCTTCACAGCTAATGCCTTTGCCTGCTAGGGGTTCTGTAGCATTGACGTTTCTAGTCAATGGAAGACTAATGAGTGATA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU78758 lncRNA upstream 4327 17981033 ~ 17983521 (+) True G62912
TU78749 lncRNA upstream 32574 17954323 ~ 17955274 (+) True G62909
TU78590 lncRNA upstream 484585 17404385 ~ 17503263 (+) True G62781
TU78603 lncRNA upstream 553648 17433642 ~ 17434200 (+) False AMCG00020370
TU78471 lncRNA upstream 941698 17030193 ~ 17046150 (+) True G62681
TU78838 lncRNA downstream 102854 18134993 ~ 18138267 (+) True G62975
TU78859 lncRNA downstream 165440 18197579 ~ 18200101 (+) False G62989
TU78860 lncRNA downstream 165440 18197579 ~ 18200808 (+) True G62989
TU78861 lncRNA downstream 169705 18201844 ~ 18202070 (+) True G62990
TU78862 lncRNA downstream 172821 18204960 ~ 18205970 (+) True G62991
AMCG00020395 mRNA upstream 7297 17956708 ~ 17980551 (+) True AMCG00020395
AMCG00020396 mRNA upstream 37789 17945158 ~ 17950059 (+) True AMCG00020396
AMCG00020394 mRNA upstream 46012 17930929 ~ 17941836 (+) True AMCG00020394
AMCG00020393 mRNA upstream 61432 17917969 ~ 17926416 (+) True AMCG00020393
AMCG00020399 mRNA upstream 75708 17905597 ~ 17912140 (+) True AMCG00020399
AMCG00020408 mRNA downstream 27986 18060125 ~ 18065789 (+) False AMCG00020408
AMCG00020407 mRNA downstream 38481 18070620 ~ 18072051 (+) False AMCG00020407
AMCG00020406 mRNA downstream 87574 18119713 ~ 18134812 (+) True AMCG00020406
AMCG00020405 mRNA downstream 106748 18138887 ~ 18178120 (+) True AMCG00020405
AMCG00020412 mRNA downstream 149937 18182076 ~ 18186048 (+) True AMCG00020412
TU78735 other upstream 58944 17928328 ~ 17928904 (+) True G62895
TU78611 other upstream 515979 17459160 ~ 17471869 (+) True AMCG00020371
TU78405 other upstream 1171991 16814374 ~ 16815857 (+) True G62632
TU77751 other upstream 3518548 14467800 ~ 14469300 (+) True AMCG00020281
TU77582 other upstream 4036801 13948426 ~ 13951047 (+) True AMCG00020267
TU78775 other downstream 26419 18058558 ~ 18061864 (+) True AMCG00020408
TU78779 other downstream 35648 18067787 ~ 18072043 (+) True AMCG00020407
TU78921 other downstream 300430 18332569 ~ 18334032 (+) True G63045
TU79166 other downstream 1565099 19597238 ~ 19600737 (+) False AMCG00020439
TU79182 other downstream 1599186 19631325 ~ 19636221 (+) True AMCG00020438

Expression Profile