RNA id: TU79682


Basic Information

Item Value
RNA id TU79682
length 202
lncRNA type inter_gene
GC content 0.55
exon number 1
gene id G63685
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 22552382 ~ 22552583 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTGATGTCAATACGGTACGATAGCTGGCAATGACACGGCTGCAGGCCACCTCCATAATAAGCGCTGGTTTCTTCTCGGCCACAAAGACATTACGCAGGATCCTCGCCAGTTCCCCCAGCCGTGACATCATCAGCAATCGCTCCTCCTGCTGAGGGTTGCGCGTCATCATGGCCTGGATCTTCTGAGCCTCCTTCGCTCGTAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU79681 lncRNA downstream 79 22552000 ~ 22552303 (-) True G63684
TU79680 lncRNA downstream 584 22551520 ~ 22551798 (-) True G63683
TU79679 lncRNA downstream 2215 22549947 ~ 22550167 (-) True G63682
TU79678 lncRNA downstream 2655 22549415 ~ 22549727 (-) True G63681
TU79677 lncRNA downstream 6325 22545768 ~ 22546057 (-) True G63680
TU79826 lncRNA upstream 509475 23062058 ~ 23068200 (-) True G63799
TU79818 lncRNA upstream 515736 23068319 ~ 23070302 (-) True G63791
TU79827 lncRNA upstream 517818 23070401 ~ 23070820 (-) True G63800
TU79863 lncRNA upstream 619225 23171808 ~ 23182107 (-) True G63829
TU79873 lncRNA upstream 641561 23194144 ~ 23194529 (-) True G63834
AMCG00020492 mRNA downstream 39438 22474293 ~ 22512944 (-) True AMCG00020492
AMCG00020489 mRNA downstream 85615 22444305 ~ 22466767 (-) False AMCG00020489
AMCG00020488 mRNA downstream 197856 22352946 ~ 22354526 (-) True AMCG00020488
AMCG00020482 mRNA downstream 227417 22321085 ~ 22324965 (-) True AMCG00020482
AMCG00020483 mRNA downstream 244907 22270714 ~ 22307475 (-) True AMCG00020483
AMCG00020493 mRNA upstream 265 22552848 ~ 22579832 (-) True AMCG00020493
AMCG00020494 mRNA upstream 31075 22583658 ~ 22588193 (-) True AMCG00020494
AMCG00020495 mRNA upstream 49357 22601940 ~ 22616819 (-) True AMCG00020495
AMCG00020498 mRNA upstream 225154 22777737 ~ 22789084 (-) True AMCG00020498
AMCG00020502 mRNA upstream 237870 22790453 ~ 22824939 (-) True AMCG00020502
TU79676 other downstream 7693 22543842 ~ 22544689 (-) True G63679
TU79413 other downstream 1239777 21312202 ~ 21312605 (-) True G63464
TU78822 other downstream 4512422 18037042 ~ 18039960 (-) False G62961
TU78814 other downstream 4536522 18006168 ~ 18015860 (-) True G62961
TU78823 other downstream 4555365 17994544 ~ 17997017 (-) False AMCG00020403
TU79847 other upstream 602109 23154692 ~ 23161900 (-) True G63819
TU80215 other upstream 2124164 24676747 ~ 24677810 (-) False AMCG00020561
TU80345 other upstream 2558527 25111110 ~ 25112551 (-) True AMCG00020581
TU80367 other upstream 2568515 25121098 ~ 25139385 (-) False G64247
TU80385 other upstream 2656476 25209059 ~ 25211063 (-) True G64260

Expression Profile