RNA id: TU82340



Basic Information


Item Value
RNA id TU82340
length 338
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G65858
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 34116606 ~ 34116943 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GACGAGACAAGTAGAAGAACACAAAGTGAGCTACTTAAAGACTTTCACACGTCTTCACTCGTTCAGCCGCTTCACTTTACTCTGGGTCTCCTGCGCCTCCAACTCCTCCAGCATGTTCGGGTGGGCTGGCAGGATCCAATGAGCATCTGAAACggggtttcttttattttgcgcACCGCAGTCATCACAACttgcacattttcctttttctttctgtctgtttctggACTGCCGTACTCCGGACTGAACGGAAGACAGtgcttttttgtattgattgggtttttatttccatttttttttttttttatgtttcatttcTGATCCCAAGAAGAAACGCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU82325 lncRNA downstream 63498 34052460 ~ 34053108 (-) True G65845
TU82324 lncRNA downstream 65537 34049996 ~ 34051069 (-) True G65844
TU82289 lncRNA downstream 134580 33981790 ~ 33982026 (-) True G65815
TU82287 lncRNA downstream 154415 33961177 ~ 33962191 (-) True G65813
TU82241 lncRNA downstream 263980 33838247 ~ 33852626 (-) False G65776
TU82349 lncRNA upstream 98114 34215057 ~ 34215559 (-) True G65867
TU82355 lncRNA upstream 101816 34218759 ~ 34220010 (-) True G65872
TU82420 lncRNA upstream 299714 34416657 ~ 34420190 (-) True G65915
TU82465 lncRNA upstream 397425 34514368 ~ 34515898 (-) True G65957
TU82523 lncRNA upstream 629998 34746941 ~ 34747361 (-) True G66001
AMCG00020807 mRNA downstream 2917 34112643 ~ 34113689 (-) True AMCG00020807
AMCG00020803 mRNA downstream 41002 34056954 ~ 34075604 (-) True AMCG00020803
AMCG00020805 mRNA downstream 89044 34023019 ~ 34027562 (-) True AMCG00020805
AMCG00020804 mRNA downstream 120881 33992809 ~ 33995725 (-) True AMCG00020804
AMCG00020798 mRNA downstream 193171 33915581 ~ 33923435 (-) True AMCG00020798
AMCG00020811 mRNA upstream 91966 34208909 ~ 34211086 (-) True AMCG00020811
AMCG00020813 mRNA upstream 99953 34216896 ~ 34220680 (-) True AMCG00020813
AMCG00020810 mRNA upstream 105403 34222346 ~ 34230487 (-) True AMCG00020810
AMCG00020812 mRNA upstream 122946 34239889 ~ 34272166 (-) True AMCG00020812
AMCG00020815 mRNA upstream 173044 34289987 ~ 34314712 (-) True AMCG00020815
TU82216 other downstream 747501 33368625 ~ 33369105 (-) True G65756
TU82127 other downstream 1225113 32886364 ~ 32891493 (-) True G65679
TU82083 other downstream 1459587 32655134 ~ 32657019 (-) True G65641
TU82051 other downstream 1505911 32607862 ~ 32610695 (-) True AMCG00020774
TU81960 other downstream 1751464 32361235 ~ 32365142 (-) True G65549
TU82397 other upstream 105372 34222315 ~ 34239697 (-) False AMCG00020810
TU82568 other upstream 691831 34808774 ~ 34814169 (-) False AMCG00020836
TU82585 other upstream 745676 34862619 ~ 34865305 (-) True G66054
TU82718 other upstream 1032625 35149568 ~ 35170179 (-) False AMCG00020853
TU82719 other upstream 1045871 35162814 ~ 35170179 (-) True AMCG00020853

Expression Profile