RNA id: TU82677


Basic Information

Item Value
RNA id TU82677
length 308
lncRNA type sense_over
GC content 0.54
exon number 2
gene id G66126
representative False

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 35079678 ~ 35095653 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ggggaaaaaaaaaaaaaaaaaaatctccatcGGGGCTTGCAAATGGGAATGCGAAGGGTGAGCGGTCAGAGGTTGGAGGTCAAGGGGCTCAGAGCTGGCCACAGTCTGCGATGGTGATTTTAGCAGAAGTCTTTCCGCTGTTGGAGCCGAAGCCCTCCACCTTCCGGATGATGTCCATGCCGCCGACCACATTGCCGAACACGACGTGCTTCCCGTCCAGCCTGGAAGGAACAGGGGAGAGGTTAGGACTGGGCTGAGGGGGAAGTCTTGGCAACAAACCTACAATGCAGTTGCTATTCTGAATGAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU82675 lncRNA downstream 98 35079678 ~ 35081867 (-) True G66126
TU82676 lncRNA downstream 98 35079678 ~ 35081867 (-) False G66126
TU82668 lncRNA downstream 4403 35003578 ~ 35077562 (-) True G66123
TU82629 lncRNA downstream 138999 34898784 ~ 34942966 (-) True G66087
TU82573 lncRNA downstream 240723 34838761 ~ 34841242 (-) False AMCG00020837
TU82716 lncRNA upstream 39325 35134978 ~ 35135563 (-) True G66154
TU82744 lncRNA upstream 156749 35252402 ~ 35252669 (-) True G66181
TU82781 lncRNA upstream 249053 35344706 ~ 35349499 (-) True AMCG00020867
TU82807 lncRNA upstream 333531 35429184 ~ 35429394 (-) True G66228
TU82811 lncRNA upstream 337625 35433278 ~ 35433565 (-) True G66232
AMCG00020849 mRNA downstream 58153 35009891 ~ 35023812 (-) True AMCG00020849
AMCG00020845 mRNA downstream 190260 34890247 ~ 34891705 (-) True AMCG00020845
AMCG00020837 mRNA downstream 240642 34838761 ~ 34841323 (-) True AMCG00020837
AMCG00020838 mRNA downstream 255336 34818213 ~ 34826629 (-) True AMCG00020838
AMCG00020836 mRNA downstream 267671 34808604 ~ 34814294 (-) True AMCG00020836
AMCG00020851 mRNA upstream 5354 35101007 ~ 35111425 (-) True AMCG00020851
AMCG00020852 mRNA upstream 28762 35124415 ~ 35127755 (-) True AMCG00020852
AMCG00020853 mRNA upstream 67882 35163535 ~ 35167869 (-) False AMCG00020853
AMCG00020860 mRNA upstream 93867 35189520 ~ 35197646 (-) True AMCG00020860
AMCG00020861 mRNA upstream 140098 35235751 ~ 35238599 (-) True AMCG00020861
TU82585 other downstream 216660 34862619 ~ 34865305 (-) True G66054
TU82568 other downstream 267796 34808774 ~ 34814169 (-) False AMCG00020836
TU82397 other downstream 842268 34222315 ~ 34239697 (-) False AMCG00020810
TU82216 other downstream 1712860 33368625 ~ 33369105 (-) True G65756
TU82127 other downstream 2190472 32886364 ~ 32891493 (-) True G65679
TU82718 other upstream 53915 35149568 ~ 35170179 (-) False AMCG00020853
TU82719 other upstream 67161 35162814 ~ 35170179 (-) True AMCG00020853
TU82875 other upstream 583779 35679432 ~ 35684555 (-) True G66279
TU82986 other upstream 718316 35813969 ~ 35819830 (-) True AMCG00020887
TU83060 other upstream 880111 35975764 ~ 35986696 (-) False AMCG00020900

Expression Profile