RNA id: TU82807



Basic Information


Item Value
RNA id TU82807
length 211
lncRNA type inter_gene
GC content 0.54
exon number 1
gene id G66228
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 35429184 ~ 35429394 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CACAGTGCCCATGGACAACAGCTGGACTCATGCTGGAGCTGTAGTGCACACTGGACCTGGCTATTAGTGCAGGTGTCACTACCATGGTGTATTGTTTATCTTCGTGTGTTGGTGGTAAATTGACAGGTTGTATTTCCTCCCTCAGGTTGCTGTGGCGGTGCGTGACTGAGCCAGGTCTGGGTGAGGGTGGCAGGGCAGAGACAGGGGTTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU82781 lncRNA downstream 79685 35344706 ~ 35349499 (-) True AMCG00020867
TU82744 lncRNA downstream 176515 35252402 ~ 35252669 (-) True G66181
TU82716 lncRNA downstream 293621 35134978 ~ 35135563 (-) True G66154
TU82674 lncRNA downstream 333531 35081965 ~ 35095653 (-) False G66126
TU82677 lncRNA downstream 333531 35081965 ~ 35095653 (-) False G66126
TU82811 lncRNA upstream 3884 35433278 ~ 35433565 (-) True G66232
TU82845 lncRNA upstream 6896 35436290 ~ 35502312 (-) True G66259
TU82874 lncRNA upstream 221586 35650980 ~ 35692460 (-) False G66279
TU82877 lncRNA upstream 265574 35694968 ~ 35696969 (-) True AMCG00020876
TU82880 lncRNA upstream 265574 35694968 ~ 35696969 (-) False AMCG00020876
AMCG00020865 mRNA downstream 56928 35361459 ~ 35372256 (-) True AMCG00020865
AMCG00020867 mRNA downstream 79958 35347274 ~ 35349226 (-) False AMCG00020867
AMCG00020866 mRNA downstream 119113 35300385 ~ 35310071 (-) True AMCG00020866
AMCG00020862 mRNA downstream 172984 35253794 ~ 35256200 (-) True AMCG00020862
AMCG00020861 mRNA downstream 190585 35235751 ~ 35238599 (-) True AMCG00020861
AMCG00020871 mRNA upstream 10635 35440029 ~ 35445018 (-) True AMCG00020871
AMCG00020870 mRNA upstream 17460 35446854 ~ 35485425 (-) True AMCG00020870
AMCG00020873 mRNA upstream 157427 35586821 ~ 35591343 (-) True AMCG00020873
AMCG00020877 mRNA upstream 189230 35618624 ~ 35631985 (-) True AMCG00020877
AMCG00020881 mRNA upstream 207656 35637050 ~ 35658112 (-) True AMCG00020881
TU82718 other downstream 259005 35149568 ~ 35170179 (-) False AMCG00020853
TU82719 other downstream 259005 35162814 ~ 35170179 (-) True AMCG00020853
TU82585 other downstream 563879 34862619 ~ 34865305 (-) True G66054
TU82568 other downstream 615015 34808774 ~ 34814169 (-) False AMCG00020836
TU82397 other downstream 1189487 34222315 ~ 34239697 (-) False AMCG00020810
TU82875 other upstream 250038 35679432 ~ 35684555 (-) True G66279
TU82986 other upstream 384575 35813969 ~ 35819830 (-) True AMCG00020887
TU83060 other upstream 546370 35975764 ~ 35986696 (-) False AMCG00020900
TU83279 other upstream 1611053 37040447 ~ 37045939 (-) False AMCG00020923
TU83289 other upstream 1635769 37065163 ~ 37067792 (-) False AMCG00020922

Expression Profile