RNA id: TU83019



Basic Information


Item Value
RNA id TU83019
length 268
lncRNA type read_through
GC content 0.40
exon number 2
gene id G66395
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 36004619 ~ 36074421 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CAGGTTGCAATGCAGTTCTTTATTTGAATGCCACTGAACAGGTCAGTCAGGCCCCGCGCTCACATGGTATGGAGGGTGACAAGTTCcaaaattatgattatgaacatgataatgggaattaacattattaaaaacatgaaaatgcatattgtcaCCTTTTACAAAGTTGCCATGGAAACTGGTCAGAAGTGAGACATTTCCCCGCAGAGCACTGGTGGACAGACATTAAAACTTAAATAGTTTccgtattgtattttGCCCCTTCCCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU82953 lncRNA upstream 147591 35798710 ~ 35857028 (+) True G66342
TU82960 lncRNA upstream 186840 35813743 ~ 35817779 (+) True G66348
TU82931 lncRNA upstream 236048 35768241 ~ 35768571 (+) True G66325
TU82924 lncRNA upstream 243587 35758108 ~ 35761032 (+) True G66319
TU82891 lncRNA upstream 288370 35716045 ~ 35716249 (+) True G66290
TU83173 lncRNA downstream 650473 36724894 ~ 36725129 (+) True G66524
TU83177 lncRNA downstream 731899 36806320 ~ 36806577 (+) True G66528
TU83253 lncRNA downstream 999258 37073679 ~ 37074634 (+) True G66602
TU83364 lncRNA downstream 1214093 37288514 ~ 37288841 (+) True G66696
TU83368 lncRNA downstream 1226827 37301248 ~ 37301598 (+) True G66700
AMCG00020890 mRNA upstream 17927 35958629 ~ 35986692 (+) True AMCG00020890
AMCG00020892 mRNA upstream 54444 35937442 ~ 35950175 (+) True AMCG00020892
AMCG00020893 mRNA upstream 67469 35930622 ~ 35937150 (+) True AMCG00020893
AMCG00020891 mRNA upstream 78125 35909352 ~ 35926494 (+) True AMCG00020891
AMCG00020884 mRNA upstream 144924 35851639 ~ 35859695 (+) True AMCG00020884
AMCG00020902 mRNA downstream 27176 36101597 ~ 36114326 (+) True AMCG00020902
AMCG00020901 mRNA downstream 104504 36178925 ~ 36184018 (+) True AMCG00020901
AMCG00020907 mRNA downstream 113328 36187749 ~ 36194843 (+) True AMCG00020907
AMCG00020908 mRNA downstream 122026 36196447 ~ 36203860 (+) True AMCG00020908
AMCG00020910 mRNA downstream 130909 36205330 ~ 36226349 (+) True AMCG00020910
TU82978 other upstream 96217 35867393 ~ 35908402 (+) True G66362
TU82915 other upstream 254265 35747225 ~ 35750354 (+) True AMCG00020874
TU82706 other upstream 839634 35163813 ~ 35164985 (+) True G66149
TU82596 other upstream 996297 34967844 ~ 35008322 (+) True G66060
TU82530 other upstream 1217145 34784212 ~ 34787474 (+) True G66008
TU83151 other downstream 180278 36254699 ~ 36256511 (+) True G66506
TU83200 other downstream 840394 36914815 ~ 36917436 (+) True G66551
TU83857 other downstream 4246692 40321113 ~ 40321821 (+) True G67108
TU84041 other downstream 4977051 41051472 ~ 41052558 (+) True AMCG00021005
TU84094 other downstream 5523802 41598223 ~ 41602113 (+) True G67323

Expression Profile