RNA id: TU83151



Basic Information


Item Value
RNA id TU83151
length 807
RNA type TUCP
GC content 0.57
exon number 2
gene id G66506
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 36254699 ~ 36256511 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TCAAATCAGGTTTCAATATTTCCAGGACTGGCCCTAAAATCCCGACGTCGGTGCCTCCATCTTGCCCACACAGCAGCTCCGTGGCAGACGTGCACCCCGCAGCCCGGATCATGCAGTTTAAAAGCTCTGCAGCCTCTTGCTTCGACTGTGAGCTCGTCCACGGCCAGTCTTGTGAATGGGTCAGcgcaaacacaaacagaagggGCGTCACTTTGTGGGCCAGAGCTCTCACAGGAGCGGCTGCCCTGTCGCAGGGCACGAAACCCTTATCCGCCTCGAGCCGCCTCAGCAGGGAGAGGAAGACTCGGTTGACGAGGCACATCTTCTCTGGGATCCCTGCGTACGAGCCGGGGGGCAGTTCTCCACTGTCCGTGTCGCAGAGCGGGAGAGCTGCGTAGTGGATGAGGGTGCTGGTGAAGTCGAGGTATAGCGCCCTTATATTGGTATCCTGGTTGGCACAGCAGTCAGAGAACAGCCAGTGACAGTCTCCCGTTTCGAGCAGGTGCTGTGTGCTCTGTAAGATGGCCTCCTTGGTTTGCGGGCAGCTCTCCACTTGGAATAAGTCCTGGATCTGGGAGAGGACCTTCACCACAGACAGGGAGGGGGCTTCCCCAGGGCTGCACAGAATGCCAGTCAGATCCATGATTGAAGAAACTGCTGCAGCCTGTGTTGCTTGGCTGGTTGTATTTGATGGCTGTAACTGACCAGATTACATGTTTGGTTTCCCTCTCCAGCCACAGCACAAAACACGCCTTTGCCGGCGCAACACCAAAATAGTTCCGCCTGCGCCGAGAAACAAAGAGCGCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU83019 lncRNA upstream 180278 36004619 ~ 36074421 (+) True G66395
TU82953 lncRNA upstream 397671 35798710 ~ 35857028 (+) True G66342
TU82960 lncRNA upstream 436920 35813743 ~ 35817779 (+) True G66348
TU82931 lncRNA upstream 486128 35768241 ~ 35768571 (+) True G66325
TU82924 lncRNA upstream 493667 35758108 ~ 35761032 (+) True G66319
TU83173 lncRNA downstream 468383 36724894 ~ 36725129 (+) True G66524
TU83177 lncRNA downstream 549809 36806320 ~ 36806577 (+) True G66528
TU83253 lncRNA downstream 817168 37073679 ~ 37074634 (+) True G66602
TU83364 lncRNA downstream 1032003 37288514 ~ 37288841 (+) True G66696
TU83368 lncRNA downstream 1044737 37301248 ~ 37301598 (+) True G66700
AMCG00020909 mRNA upstream 13479 36234933 ~ 36241220 (+) True AMCG00020909
AMCG00020910 mRNA upstream 28350 36205330 ~ 36226349 (+) True AMCG00020910
AMCG00020908 mRNA upstream 50839 36196447 ~ 36203860 (+) True AMCG00020908
AMCG00020907 mRNA upstream 59856 36187749 ~ 36194843 (+) True AMCG00020907
AMCG00020901 mRNA upstream 70681 36178925 ~ 36184018 (+) True AMCG00020901
AMCG00020914 mRNA downstream 594984 36851495 ~ 36869578 (+) True AMCG00020914
AMCG00020919 mRNA downstream 791131 37047642 ~ 37058036 (+) True AMCG00020919
AMCG00020925 mRNA downstream 837775 37094286 ~ 37112090 (+) True AMCG00020925
AMCG00020926 mRNA downstream 902141 37158652 ~ 37165302 (+) True AMCG00020926
AMCG00020930 mRNA downstream 927153 37183664 ~ 37185928 (+) True AMCG00020930
TU82978 other upstream 346297 35867393 ~ 35908402 (+) True G66362
TU82915 other upstream 504345 35747225 ~ 35750354 (+) True AMCG00020874
TU82706 other upstream 1089714 35163813 ~ 35164985 (+) True G66149
TU82596 other upstream 1246377 34967844 ~ 35008322 (+) True G66060
TU82530 other upstream 1467225 34784212 ~ 34787474 (+) True G66008
TU83200 other downstream 658304 36914815 ~ 36917436 (+) True G66551
TU83857 other downstream 4064602 40321113 ~ 40321821 (+) True G67108
TU84041 other downstream 4794961 41051472 ~ 41052558 (+) True AMCG00021005
TU84094 other downstream 5341712 41598223 ~ 41602113 (+) True G67323
TU84255 other downstream 5796419 42052930 ~ 42053675 (+) True G67459

Expression Profile