RNA id: TU83173



Basic Information


Item Value
RNA id TU83173
length 236
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G66524
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 36724894 ~ 36725129 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gtaaaggctacaagaccatctccaagcagcttgatgttcctgtgacaacagttgcaaatattattaagaagttcaaggtccatggaactgtagccaacctccctgggcgcggccgcaagaggaaaattgaccccagattgaacagaaggatagtgcgaatggcagaaaaagaaccaaggataactgccaaagagatacaagctgaactccaaggtgaaggtacgtcagtttctgat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU83019 lncRNA upstream 650473 36004619 ~ 36074421 (+) True G66395
TU82953 lncRNA upstream 867866 35798710 ~ 35857028 (+) True G66342
TU82960 lncRNA upstream 907115 35813743 ~ 35817779 (+) True G66348
TU82931 lncRNA upstream 956323 35768241 ~ 35768571 (+) True G66325
TU82924 lncRNA upstream 963862 35758108 ~ 35761032 (+) True G66319
TU83177 lncRNA downstream 81191 36806320 ~ 36806577 (+) True G66528
TU83253 lncRNA downstream 348550 37073679 ~ 37074634 (+) True G66602
TU83364 lncRNA downstream 563385 37288514 ~ 37288841 (+) True G66696
TU83368 lncRNA downstream 576119 37301248 ~ 37301598 (+) True G66700
TU83369 lncRNA downstream 578920 37304049 ~ 37309335 (+) True G66701
AMCG00020909 mRNA upstream 483674 36234933 ~ 36241220 (+) True AMCG00020909
AMCG00020910 mRNA upstream 498545 36205330 ~ 36226349 (+) True AMCG00020910
AMCG00020908 mRNA upstream 521034 36196447 ~ 36203860 (+) True AMCG00020908
AMCG00020907 mRNA upstream 530051 36187749 ~ 36194843 (+) True AMCG00020907
AMCG00020901 mRNA upstream 540876 36178925 ~ 36184018 (+) True AMCG00020901
AMCG00020914 mRNA downstream 126366 36851495 ~ 36869578 (+) True AMCG00020914
AMCG00020919 mRNA downstream 322513 37047642 ~ 37058036 (+) True AMCG00020919
AMCG00020925 mRNA downstream 369157 37094286 ~ 37112090 (+) True AMCG00020925
AMCG00020926 mRNA downstream 433523 37158652 ~ 37165302 (+) True AMCG00020926
AMCG00020930 mRNA downstream 458535 37183664 ~ 37185928 (+) True AMCG00020930
TU83151 other upstream 468383 36254699 ~ 36256511 (+) True G66506
TU82978 other upstream 816492 35867393 ~ 35908402 (+) True G66362
TU82915 other upstream 974540 35747225 ~ 35750354 (+) True AMCG00020874
TU82706 other upstream 1559909 35163813 ~ 35164985 (+) True G66149
TU82596 other upstream 1716572 34967844 ~ 35008322 (+) True G66060
TU83200 other downstream 189686 36914815 ~ 36917436 (+) True G66551
TU83857 other downstream 3595984 40321113 ~ 40321821 (+) True G67108
TU84041 other downstream 4326343 41051472 ~ 41052558 (+) True AMCG00021005
TU84094 other downstream 4873094 41598223 ~ 41602113 (+) True G67323
TU84255 other downstream 5327801 42052930 ~ 42053675 (+) True G67459

Expression Profile