RNA id: TU83176



Basic Information


Item Value
RNA id TU83176
length 229
lncRNA type inter_gene
GC content 0.56
exon number 1
gene id G66527
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 36747515 ~ 36747743 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gcggccaaggctcattgatgcacgtggggagcgaaggctggcccgtgtggtccgatccaacagacgagctactgtagctcaaattgctgaaaaagtgaatgctggttctgatagaaaagtgtcagaacacacagtgcatcgcagtttgttgcgtatggggctgcgtagccgcagaccagtcagggtgcccatgctgacccctgtccactgccgaaagcgcctacaatgg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU83158 lncRNA downstream 464988 36278150 ~ 36282527 (-) True AMCG00020911
TU83143 lncRNA downstream 510588 36235772 ~ 36236927 (-) True G66499
TU83061 lncRNA downstream 760819 35975764 ~ 35986696 (-) True AMCG00020900
TU83045 lncRNA downstream 810257 35926538 ~ 35937258 (-) True G66416
TU82933 lncRNA downstream 975829 35771484 ~ 35771686 (-) True G66327
TU83184 lncRNA upstream 103327 36851070 ~ 36851636 (-) True G66535
TU83185 lncRNA upstream 121674 36869417 ~ 36870155 (-) True G66536
TU83275 lncRNA upstream 266238 37013981 ~ 37019796 (-) True G66613
TU83352 lncRNA upstream 520039 37267782 ~ 37268223 (-) True G66685
TU83423 lncRNA upstream 747380 37495123 ~ 37495370 (-) True G66740
AMCG00020913 mRNA downstream 420686 36284882 ~ 36326829 (-) True AMCG00020913
AMCG00020911 mRNA downstream 464986 36260993 ~ 36282529 (-) False AMCG00020911
AMCG00020912 mRNA downstream 491005 36246583 ~ 36256510 (-) True AMCG00020912
AMCG00020903 mRNA downstream 569254 36175349 ~ 36178261 (-) True AMCG00020903
AMCG00020905 mRNA downstream 604422 36128362 ~ 36143093 (-) True AMCG00020905
AMCG00020915 mRNA upstream 124591 36872334 ~ 36874433 (-) True AMCG00020915
AMCG00020917 mRNA upstream 129732 36877475 ~ 36894127 (-) True AMCG00020917
AMCG00020918 mRNA upstream 161416 36909159 ~ 36913434 (-) True AMCG00020918
AMCG00020916 mRNA upstream 166744 36914487 ~ 36931628 (-) True AMCG00020916
AMCG00020924 mRNA upstream 226666 36974409 ~ 36998756 (-) True AMCG00020924
TU83060 other downstream 760819 35975764 ~ 35986696 (-) False AMCG00020900
TU82986 other downstream 927685 35813969 ~ 35819830 (-) True AMCG00020887
TU82875 other downstream 1062960 35679432 ~ 35684555 (-) True G66279
TU82718 other downstream 1577336 35149568 ~ 35170179 (-) False AMCG00020853
TU83279 other upstream 292704 37040447 ~ 37045939 (-) False AMCG00020923
TU83289 other upstream 317420 37065163 ~ 37067792 (-) False AMCG00020922
TU83462 other upstream 884057 37631800 ~ 37632576 (-) True AMCG00020943
TU83728 other upstream 2302473 39050216 ~ 39104867 (-) False AMCG00020970
TU84154 other upstream 4852658 41600401 ~ 41602270 (-) False AMCG00021012

Expression Profile