RNA id: TU83423



Basic Information


Item Value
RNA id TU83423
length 248
lncRNA type inter_gene
GC content 0.57
exon number 1
gene id G66740
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 37495123 ~ 37495370 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gcagcgtaaggatctgagcgactttgacaagggccaaattgcgatggctagacgactgggtcagagcatctccaaaactgcagctcttgtggggtgttcccggtctgcagtgctcagtacctatcaaaagtgtccaaggaaggaaaagcggtgaaccggcgacagggtcatgggcggccaaggctcactgatgcacgtggggagcgaaggctggcccgtgtggtccgatccaacagacgagctactgt

Function


GO: NA

KEGG:

id description
ko04913 Ovarian steroidogenesis

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU83352 lncRNA downstream 226900 37267782 ~ 37268223 (-) True G66685
TU83275 lncRNA downstream 475327 37013981 ~ 37019796 (-) True G66613
TU83185 lncRNA downstream 624968 36869417 ~ 36870155 (-) True G66536
TU83184 lncRNA downstream 643487 36851070 ~ 36851636 (-) True G66535
TU83176 lncRNA downstream 747380 36747515 ~ 36747743 (-) True G66527
TU83474 lncRNA upstream 241393 37736763 ~ 37739197 (-) True G66786
TU83511 lncRNA upstream 404097 37899467 ~ 37899878 (-) True G66817
TU83550 lncRNA upstream 685667 38181037 ~ 38181274 (-) True G66851
TU83575 lncRNA upstream 782624 38277994 ~ 38278539 (-) True G66872
TU83634 lncRNA upstream 1199622 38694992 ~ 38697487 (-) True G66920
AMCG00020936 mRNA downstream 40255 37398299 ~ 37454868 (-) True AMCG00020936
AMCG00020934 mRNA downstream 138953 37337911 ~ 37356170 (-) True AMCG00020934
AMCG00020935 mRNA downstream 157869 37325214 ~ 37337254 (-) True AMCG00020935
AMCG00020933 mRNA downstream 171423 37303965 ~ 37323700 (-) True AMCG00020933
AMCG00020932 mRNA downstream 212254 37241039 ~ 37282869 (-) True AMCG00020932
AMCG00020937 mRNA upstream 29335 37524705 ~ 37527768 (-) True AMCG00020937
AMCG00020939 mRNA upstream 39385 37534755 ~ 37539399 (-) True AMCG00020939
AMCG00020938 mRNA upstream 50254 37545624 ~ 37549905 (-) True AMCG00020938
AMCG00020940 mRNA upstream 61210 37556580 ~ 37566120 (-) True AMCG00020940
AMCG00020943 mRNA upstream 136407 37631777 ~ 37632492 (-) False AMCG00020943
TU83289 other downstream 427331 37065163 ~ 37067792 (-) False AMCG00020922
TU83279 other downstream 449184 37040447 ~ 37045939 (-) False AMCG00020923
TU83060 other downstream 1508427 35975764 ~ 35986696 (-) False AMCG00020900
TU82986 other downstream 1675293 35813969 ~ 35819830 (-) True AMCG00020887
TU82875 other downstream 1810568 35679432 ~ 35684555 (-) True G66279
TU83462 other upstream 136430 37631800 ~ 37632576 (-) True AMCG00020943
TU83728 other upstream 1554846 39050216 ~ 39104867 (-) False AMCG00020970
TU84154 other upstream 4105031 41600401 ~ 41602270 (-) False AMCG00021012

Expression Profile