RNA id: TU83550



Basic Information


Item Value
RNA id TU83550
length 238
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G66851
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 38181037 ~ 38181274 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


cttggccgcccatgaccctgttgccggttcaccgcttttccttccttggaccacttttgataggtactgagcactgcagaccgggaacaccccacaagagctgcagttttggagatgctctgacccagtcgtctagccatcacaatttggctcttgtcaaagtcgctcagatccttacgcttgcccatttttcctgcttctaacacgtcaactttgaggacaaaatgttcacttgctg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU83511 lncRNA downstream 281159 37899467 ~ 37899878 (-) True G66817
TU83474 lncRNA downstream 441840 37736763 ~ 37739197 (-) True G66786
TU83423 lncRNA downstream 685667 37495123 ~ 37495370 (-) True G66740
TU83352 lncRNA downstream 912814 37267782 ~ 37268223 (-) True G66685
TU83275 lncRNA downstream 1161241 37013981 ~ 37019796 (-) True G66613
TU83575 lncRNA upstream 96720 38277994 ~ 38278539 (-) True G66872
TU83634 lncRNA upstream 513718 38694992 ~ 38697487 (-) True G66920
TU83640 lncRNA upstream 525998 38707272 ~ 38732240 (-) True G66926
TU83642 lncRNA upstream 543017 38724291 ~ 38772808 (-) False G66927
TU83641 lncRNA upstream 590346 38771620 ~ 38772808 (-) True G66927
AMCG00020952 mRNA downstream 85447 38095102 ~ 38095590 (-) True AMCG00020952
AMCG00020953 mRNA downstream 150065 37968172 ~ 38030972 (-) True AMCG00020953
AMCG00020949 mRNA downstream 288697 37842900 ~ 37892340 (-) True AMCG00020949
AMCG00020947 mRNA downstream 359174 37815894 ~ 37821863 (-) True AMCG00020947
AMCG00020948 mRNA downstream 366140 37772151 ~ 37814897 (-) True AMCG00020948
AMCG00020958 mRNA upstream 51392 38232666 ~ 38238994 (-) True AMCG00020958
AMCG00020957 mRNA upstream 60472 38241746 ~ 38260001 (-) True AMCG00020957
AMCG00020959 mRNA upstream 97361 38278635 ~ 38300419 (-) True AMCG00020959
AMCG00020961 mRNA upstream 184853 38366127 ~ 38410862 (-) True AMCG00020961
AMCG00020960 mRNA upstream 246606 38427880 ~ 38458638 (-) True AMCG00020960
TU83462 other downstream 548461 37631800 ~ 37632576 (-) True AMCG00020943
TU83289 other downstream 1113245 37065163 ~ 37067792 (-) False AMCG00020922
TU83279 other downstream 1135098 37040447 ~ 37045939 (-) False AMCG00020923
TU83060 other downstream 2194341 35975764 ~ 35986696 (-) False AMCG00020900
TU82986 other downstream 2361207 35813969 ~ 35819830 (-) True AMCG00020887
TU83728 other upstream 868942 39050216 ~ 39104867 (-) False AMCG00020970
TU84154 other upstream 3419127 41600401 ~ 41602270 (-) False AMCG00021012

Expression Profile