RNA id: TU83691



Basic Information


Item Value
RNA id TU83691
length 271
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G66970
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 39010579 ~ 39010849 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TGTTTCTAATACGCACGGCAGCAAGGTGATCTCTCTTTGATAGACAAGTTCGCTTTAAATGCAAGGAAGCGCAGCAGCATTTAATGAATCTATTctggtaaaaataatatacagtcCATTGAGCATTTATCGTCCCAATGCAGTTATTTGTATAGGCAATAAGACCTTTTATATTTGTGATTGTTAGTCCTCATTTGTTAAGCACTGAAttatatctatttaaaatgcCAGTTTGGAGAGTGTGCGCAGATTTCCCGGTATGTGGGCACGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU83593 lncRNA upstream 585327 38424712 ~ 38425252 (+) True G66887
TU83568 lncRNA upstream 734285 38275990 ~ 38276294 (+) True G66865
TU83564 lncRNA upstream 766104 38240690 ~ 38244475 (+) True G66861
TU83538 lncRNA upstream 886992 38121779 ~ 38123587 (+) False AMCG00020954
TU83521 lncRNA upstream 944914 37974803 ~ 38065665 (+) True G66826
TU83716 lncRNA downstream 38572 39049421 ~ 39049631 (+) True G66995
TU83754 lncRNA downstream 294448 39305297 ~ 39305587 (+) True G67027
TU83778 lncRNA downstream 738308 39749157 ~ 39749361 (+) True G67048
TU83931 lncRNA downstream 1553353 40564202 ~ 40570215 (+) True AMCG00020993
TU83936 lncRNA downstream 1559478 40570327 ~ 40571722 (+) True G67180
AMCG00020969 mRNA upstream 5750 38984877 ~ 39004829 (+) True AMCG00020969
AMCG00020968 mRNA upstream 38295 38953485 ~ 38972284 (+) True AMCG00020968
AMCG00020966 mRNA upstream 108974 38898945 ~ 38901605 (+) True AMCG00020966
AMCG00020967 mRNA upstream 125472 38880596 ~ 38885107 (+) True AMCG00020967
AMCG00020965 mRNA upstream 198325 38784879 ~ 38812254 (+) True AMCG00020965
AMCG00020972 mRNA downstream 1862 39012711 ~ 39027527 (+) True AMCG00020972
AMCG00020973 mRNA downstream 36411 39047260 ~ 39061811 (+) True AMCG00020973
AMCG00020978 mRNA downstream 604605 39615454 ~ 39617163 (+) True AMCG00020978
AMCG00020976 mRNA downstream 606459 39617308 ~ 39686318 (+) True AMCG00020976
AMCG00020981 mRNA downstream 790430 39801279 ~ 40063685 (+) True AMCG00020981
TU83200 other upstream 2093143 36914815 ~ 36917436 (+) True G66551
TU83151 other upstream 2754068 36254699 ~ 36256511 (+) True G66506
TU82978 other upstream 3102177 35867393 ~ 35908402 (+) True G66362
TU82915 other upstream 3260225 35747225 ~ 35750354 (+) True AMCG00020874
TU82706 other upstream 3845594 35163813 ~ 35164985 (+) True G66149
TU83857 other downstream 1310264 40321113 ~ 40321821 (+) True G67108
TU84041 other downstream 2040623 41051472 ~ 41052558 (+) True AMCG00021005
TU84094 other downstream 2587374 41598223 ~ 41602113 (+) True G67323
TU84255 other downstream 3042081 42052930 ~ 42053675 (+) True G67459
TU84320 other downstream 3415262 42426111 ~ 42465886 (+) True AMCG00021029

Expression Profile