RNA id: TU84037



Basic Information


Item Value
RNA id TU84037
length 243
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G67272
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 41038854 ~ 41039096 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ttggaagattaaccttcgccccagtctgaggtccagagcgctctggagcaggttttcatcaaggatgtctctgtacattgctgcattcatctttccctcgatcctgactagtctcccagttcctgccgctgaaaaacatccccacagcatgatgctgccaccaccatgcttcactgtagggatggtattggccaggtgatgagcggtgcctggtttcctccagacatgacacTTGCCATTCAg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU83981 lncRNA upstream 72942 40950099 ~ 40965912 (+) True G67221
TU83965 lncRNA upstream 247383 40785761 ~ 40791471 (+) True G67207
TU83966 lncRNA upstream 247383 40786685 ~ 40791471 (+) False G67207
TU83938 lncRNA upstream 463998 40573554 ~ 40574856 (+) True G67182
TU83936 lncRNA upstream 467132 40570327 ~ 40571722 (+) True G67180
TU84078 lncRNA downstream 265091 41304187 ~ 41305221 (+) True G67309
TU84079 lncRNA downstream 293170 41332266 ~ 41397674 (+) True G67310
TU84093 lncRNA downstream 468511 41507607 ~ 41508101 (+) True G67322
TU84155 lncRNA downstream 580199 41619295 ~ 41619609 (+) True G67371
TU84182 lncRNA downstream 698151 41737247 ~ 41854669 (+) True G67393
AMCG00021001 mRNA upstream 99288 40924447 ~ 40939566 (+) True AMCG00021001
AMCG00021002 mRNA upstream 125707 40910435 ~ 40913147 (+) True AMCG00021002
AMCG00021000 mRNA upstream 200081 40822569 ~ 40838773 (+) True AMCG00021000
AMCG00020999 mRNA upstream 239746 40758497 ~ 40799108 (+) True AMCG00020999
AMCG00020993 mRNA upstream 470822 40555966 ~ 40568032 (+) False AMCG00020993
AMCG00021005 mRNA downstream 12449 41051545 ~ 41062527 (+) False AMCG00021005
AMCG00021007 mRNA downstream 52137 41091233 ~ 41115596 (+) True AMCG00021007
AMCG00021010 mRNA downstream 172335 41211431 ~ 41212049 (+) True AMCG00021010
AMCG00021011 mRNA downstream 245838 41284934 ~ 41299165 (+) True AMCG00021011
AMCG00021014 mRNA downstream 329531 41368627 ~ 41370418 (+) True AMCG00021014
TU83857 other upstream 717033 40321113 ~ 40321821 (+) True G67108
TU83200 other upstream 4121418 36914815 ~ 36917436 (+) True G66551
TU83151 other upstream 4782343 36254699 ~ 36256511 (+) True G66506
TU82978 other upstream 5130452 35867393 ~ 35908402 (+) True G66362
TU82915 other upstream 5288500 35747225 ~ 35750354 (+) True AMCG00020874
TU84041 other downstream 12376 41051472 ~ 41052558 (+) True AMCG00021005
TU84094 other downstream 559127 41598223 ~ 41602113 (+) True G67323
TU84255 other downstream 1013834 42052930 ~ 42053675 (+) True G67459
TU84320 other downstream 1387015 42426111 ~ 42465886 (+) True AMCG00021029

Expression Profile