RNA id: TU84135



Basic Information


Item Value
RNA id TU84135
length 209
lncRNA type inter_gene
GC content 0.53
exon number 2
gene id G67360
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 41550415 ~ 41570291 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CAGAACTGGACctcggagcaatggaagaaggtggcctggagttcaaggtgttgacttggcctccaaattccccagatctcaatccaatcgagcatctgtgggatgtgctggccaaacaagtctgatccatggaggccccacctcgcaacttacaggacttaaaggatctgctgctaacgtcttggtgccagataccacagcacaccttc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU84133 lncRNA downstream 29918 41518717 ~ 41520497 (-) True G67358
TU84127 lncRNA downstream 42322 41507719 ~ 41508093 (-) True G67352
TU84113 lncRNA downstream 69276 41474305 ~ 41481139 (-) True G67339
TU84107 lncRNA downstream 81167 41459463 ~ 41469248 (-) True G67334
TU84067 lncRNA downstream 285946 41256169 ~ 41264469 (-) True G67298
TU84148 lncRNA upstream 22230 41592521 ~ 41592729 (-) True G67368
TU84151 lncRNA upstream 25789 41596080 ~ 41597523 (-) False AMCG00021012
TU84234 lncRNA upstream 320747 41891038 ~ 41893984 (-) True G67440
TU84258 lncRNA upstream 505032 42075323 ~ 42075754 (-) True G67462
TU84276 lncRNA upstream 579302 42149593 ~ 42149966 (-) True G67480
AMCG00021008 mRNA downstream 183058 41366724 ~ 41367357 (-) True AMCG00021008
AMCG00021006 mRNA downstream 407721 41092869 ~ 41142694 (-) True AMCG00021006
AMCG00021003 mRNA downstream 546221 41000180 ~ 41004194 (-) True AMCG00021003
AMCG00021004 mRNA downstream 550757 40997807 ~ 40999658 (-) True AMCG00021004
AMCG00020998 mRNA downstream 820789 40661926 ~ 40729626 (-) True AMCG00020998
AMCG00021012 mRNA upstream 26361 41596652 ~ 41602153 (-) True AMCG00021012
AMCG00021026 mRNA upstream 103318 41673609 ~ 41687703 (-) True AMCG00021026
AMCG00021027 mRNA upstream 404568 41974859 ~ 41975161 (-) True AMCG00021027
AMCG00021028 mRNA upstream 430358 42000649 ~ 42117898 (-) True AMCG00021028
AMCG00021031 mRNA upstream 666950 42237241 ~ 42238378 (-) True AMCG00021031
TU83728 other downstream 2445548 39050216 ~ 39104867 (-) False AMCG00020970
TU83462 other downstream 3917839 37631800 ~ 37632576 (-) True AMCG00020943
TU83289 other downstream 4482623 37065163 ~ 37067792 (-) False AMCG00020922
TU83279 other downstream 4504476 37040447 ~ 37045939 (-) False AMCG00020923
TU83060 other downstream 5563719 35975764 ~ 35986696 (-) False AMCG00020900
TU84154 other upstream 30110 41600401 ~ 41602270 (-) False AMCG00021012

Expression Profile