RNA id: TU84155



Basic Information


Item Value
RNA id TU84155
length 315
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G67371
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 41619295 ~ 41619609 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTATTCTTGTAGTGATAACATCGGCAAGGAGAAGTAATGAAATtcacgccttgtctgtggataaagcctgtctgatcttctcaggaagcaATGACAAAGTCACTCTCAGGACGAAtccggccttcctgcccaaggtttTGTCGCCATTCCACATAAACCAGCCTGTTGTCCTGGTGTCTTTCCAACCCCCTCCACATGAATCGGATGAGGactgcagactacacacactctgccctgtctgggctttgaggtgctatatgcggaggactgcgcagagccgcaaatccgaccagctgtttgtctgctacggttcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU84093 lncRNA upstream 111194 41507607 ~ 41508101 (+) True G67322
TU84079 lncRNA upstream 221621 41332266 ~ 41397674 (+) True G67310
TU84078 lncRNA upstream 314074 41304187 ~ 41305221 (+) True G67309
TU84037 lncRNA upstream 580199 41038854 ~ 41039096 (+) True G67272
TU83981 lncRNA upstream 653383 40950099 ~ 40965912 (+) True G67221
TU84182 lncRNA downstream 117638 41737247 ~ 41854669 (+) True G67393
TU84188 lncRNA downstream 271062 41890671 ~ 41893979 (+) True G67398
TU84197 lncRNA downstream 365002 41984611 ~ 41985031 (+) True G67405
TU84275 lncRNA downstream 529950 42149559 ~ 42149967 (+) True G67479
TU84316 lncRNA downstream 776116 42395725 ~ 42395996 (+) True G67519
AMCG00021009 mRNA upstream 30276 41578384 ~ 41589019 (+) True AMCG00021009
AMCG00021016 mRNA upstream 100450 41459477 ~ 41518845 (+) True AMCG00021016
AMCG00021014 mRNA upstream 248877 41368627 ~ 41370418 (+) True AMCG00021014
AMCG00021011 mRNA upstream 320130 41284934 ~ 41299165 (+) True AMCG00021011
AMCG00021010 mRNA upstream 407246 41211431 ~ 41212049 (+) True AMCG00021010
AMCG00021013 mRNA downstream 11070 41630679 ~ 41631432 (+) True AMCG00021013
AMCG00021015 mRNA downstream 38061 41657670 ~ 41658791 (+) True AMCG00021015
AMCG00021021 mRNA downstream 81256 41700865 ~ 41709287 (+) True AMCG00021021
AMCG00021020 mRNA downstream 89869 41709478 ~ 41710229 (+) True AMCG00021020
AMCG00021022 mRNA downstream 92312 41711921 ~ 41740137 (+) True AMCG00021022
TU84094 other upstream 17182 41598223 ~ 41602113 (+) True G67323
TU84041 other upstream 566737 41051472 ~ 41052558 (+) True AMCG00021005
TU83857 other upstream 1297474 40321113 ~ 40321821 (+) True G67108
TU83200 other upstream 4701859 36914815 ~ 36917436 (+) True G66551
TU83151 other upstream 5362784 36254699 ~ 36256511 (+) True G66506
TU84255 other downstream 433321 42052930 ~ 42053675 (+) True G67459
TU84320 other downstream 806502 42426111 ~ 42465886 (+) True AMCG00021029

Expression Profile