RNA id: TU84316



Basic Information


Item Value
RNA id TU84316
length 272
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G67519
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 42395725 ~ 42395996 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


cagaaccagcatgaactttttcagcaatttgagctacagtagctcatctgttggatcggaccacacgggccagccttcgctccccacgtgcatcaatgagccttggccacccatgaccctgttgccagttcactgcttttccttccttggaccacttttgataggtactgaccactgcagaccgggaacaccccacaagagctgcagttttggagatgctctgacccagtcgtctatccatcacaatttggcccttgtcaaagtcgctcaga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU84275 lncRNA upstream 245758 42149559 ~ 42149967 (+) True G67479
TU84197 lncRNA upstream 410694 41984611 ~ 41985031 (+) True G67405
TU84188 lncRNA upstream 501746 41890671 ~ 41893979 (+) True G67398
TU84182 lncRNA upstream 541056 41737247 ~ 41854669 (+) True G67393
TU84155 lncRNA upstream 776116 41619295 ~ 41619609 (+) True G67371
TU84321 lncRNA downstream 7825 42403821 ~ 42404266 (+) True G67521
TU84328 lncRNA downstream 77662 42473658 ~ 42473885 (+) True G67528
TU84333 lncRNA downstream 87532 42483528 ~ 42483927 (+) True G67533
TU84336 lncRNA downstream 189831 42585827 ~ 42586035 (+) True G67536
TU84366 lncRNA downstream 496032 42892028 ~ 42892439 (+) True G67564
AMCG00021024 mRNA upstream 270724 42122817 ~ 42125001 (+) True AMCG00021024
AMCG00021025 mRNA upstream 304069 42062717 ~ 42091656 (+) True AMCG00021025
AMCG00021023 mRNA upstream 380571 41983383 ~ 42015154 (+) True AMCG00021023
AMCG00021019 mRNA upstream 460980 41894833 ~ 41934745 (+) True AMCG00021019
AMCG00021017 mRNA upstream 533847 41841031 ~ 41861878 (+) True AMCG00021017
AMCG00021029 mRNA downstream 27347 42423343 ~ 42464183 (+) False AMCG00021029
AMCG00021034 mRNA downstream 229388 42625384 ~ 42919615 (+) True AMCG00021034
TU84255 other upstream 342050 42052930 ~ 42053675 (+) True G67459
TU84094 other upstream 793612 41598223 ~ 41602113 (+) True G67323
TU84041 other upstream 1343167 41051472 ~ 41052558 (+) True AMCG00021005
TU83857 other upstream 2073904 40321113 ~ 40321821 (+) True G67108
TU83200 other upstream 5478289 36914815 ~ 36917436 (+) True G66551
TU84320 other downstream 30115 42426111 ~ 42465886 (+) True AMCG00021029

Expression Profile