RNA id: TU84321



Basic Information


Item Value
RNA id TU84321
length 446
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G67521
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 42403821 ~ 42404266 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCAATTGGGCAtcgtttaaatgccacggcctacctgagcattgtttctgaccatgtccatccctttatgaccaccatgtacccatcctctgatggctacttccagcaggtaatgcaccatgtcacaaaggtcgaataatttcaaattggtttcttgaacatgacaatgagttcactgtactaaactggctcccacagtcaccagatctcaacccaatagagcatctttgggatgtggtggaacgggagcttcgtgccctggatgtgcatcccacaaatctccatcaactgcaagatgctatcctatcaatatgggccaacatttgtaaagaatgctttcagcaccttgttgaatcaatgccacgtagaattaaggcagttctgaaggcgaaagggggtcaaacacagtattagtatggtgttcctaataatcctttaggtgtgTGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU84316 lncRNA upstream 7825 42395725 ~ 42395996 (+) True G67519
TU84275 lncRNA upstream 253854 42149559 ~ 42149967 (+) True G67479
TU84197 lncRNA upstream 418790 41984611 ~ 41985031 (+) True G67405
TU84188 lncRNA upstream 509842 41890671 ~ 41893979 (+) True G67398
TU84182 lncRNA upstream 549152 41737247 ~ 41854669 (+) True G67393
TU84328 lncRNA downstream 69392 42473658 ~ 42473885 (+) True G67528
TU84333 lncRNA downstream 79262 42483528 ~ 42483927 (+) True G67533
TU84336 lncRNA downstream 181561 42585827 ~ 42586035 (+) True G67536
TU84366 lncRNA downstream 487762 42892028 ~ 42892439 (+) True G67564
AMCG00021024 mRNA upstream 278820 42122817 ~ 42125001 (+) True AMCG00021024
AMCG00021025 mRNA upstream 312165 42062717 ~ 42091656 (+) True AMCG00021025
AMCG00021023 mRNA upstream 388667 41983383 ~ 42015154 (+) True AMCG00021023
AMCG00021019 mRNA upstream 469076 41894833 ~ 41934745 (+) True AMCG00021019
AMCG00021017 mRNA upstream 541943 41841031 ~ 41861878 (+) True AMCG00021017
AMCG00021029 mRNA downstream 19077 42423343 ~ 42464183 (+) False AMCG00021029
AMCG00021034 mRNA downstream 221118 42625384 ~ 42919615 (+) True AMCG00021034
TU84255 other upstream 350146 42052930 ~ 42053675 (+) True G67459
TU84094 other upstream 801708 41598223 ~ 41602113 (+) True G67323
TU84041 other upstream 1351263 41051472 ~ 41052558 (+) True AMCG00021005
TU83857 other upstream 2082000 40321113 ~ 40321821 (+) True G67108
TU83200 other upstream 5486385 36914815 ~ 36917436 (+) True G66551
TU84320 other downstream 21845 42426111 ~ 42465886 (+) True AMCG00021029

Expression Profile