RNA id: TU84322


Basic Information

Item Value
RNA id TU84322
length 450
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G67522
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 42403821 ~ 42404270 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTACAcacacctaaaggattattaggaacaccatactaatactgtgtttgaccccctttcgccttcagaactgccttaattctacgtggcattgattcaacaaggtgctgaaagcattctttacaaatgttggcccatattgataggatagcatcttgcagttgatggagatttgtgggatgcacatccagggcacgaagctcccgttccaccacatcccaaagatgctctattgggttgagatctggtgactgtgggagccagtttagtacagtgaactcattgtcatgttcaagaaaccaatttgaaattattcgacctttgtgacatggtgcattacctgctggaagtagccatcagaggatgggtacatggtggtcataaagggatggacatggtcagaaacaatgctcaggtaggccgtggcatttaaacgaTGCCCAATTGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU84276 lncRNA downstream 253855 42149593 ~ 42149966 (-) True G67480
TU84258 lncRNA downstream 328067 42075323 ~ 42075754 (-) True G67462
TU84234 lncRNA downstream 509837 41891038 ~ 41893984 (-) True G67440
TU84151 lncRNA downstream 806298 41596080 ~ 41597523 (-) False AMCG00021012
TU84148 lncRNA downstream 811092 41592521 ~ 41592729 (-) True G67368
TU84334 lncRNA upstream 79315 42483585 ~ 42484218 (-) True G67534
TU84337 lncRNA upstream 181557 42585827 ~ 42586109 (-) True G67537
TU84367 lncRNA upstream 487866 42892136 ~ 42892423 (-) True G67565
AMCG00021033 mRNA downstream 53624 42322107 ~ 42350197 (-) True AMCG00021033
AMCG00021030 mRNA downstream 88379 42302926 ~ 42315442 (-) True AMCG00021030
AMCG00021032 mRNA downstream 134560 42245997 ~ 42269261 (-) True AMCG00021032
AMCG00021031 mRNA downstream 165443 42237241 ~ 42238378 (-) True AMCG00021031
AMCG00021028 mRNA downstream 285923 42000649 ~ 42117898 (-) True AMCG00021028
TU84154 other downstream 801551 41600401 ~ 41602270 (-) False AMCG00021012
TU83728 other downstream 3298954 39050216 ~ 39104867 (-) False AMCG00020970
TU83462 other downstream 4771245 37631800 ~ 37632576 (-) True AMCG00020943
TU83289 other downstream 5336029 37065163 ~ 37067792 (-) False AMCG00020922
TU83279 other downstream 5357882 37040447 ~ 37045939 (-) False AMCG00020923

Expression Profile