RNA id: TU84333


Basic Information

Item Value
RNA id TU84333
length 400
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G67533
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 42483528 ~ 42483927 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GAGGCATCAGAGATTGATGCGTAGTAAGGTAAGGAGTAGTTTTTTAGTTTGAGTCGGCACTGACTGAGTGTGTTAGTTTGGCTTCAAAGTAAGTGTACAACTTATATTTATGAATGCGGTCTACAGTCAGTTTGACCCGttaaattgttatttaacaaggaagttatattgtttttgtaacgTGTATATCTACTCAATATAGCCTTATAACGTTATTAATCGCTACTCGCAGCTAGCAAGTGAGTGTAACACGTGTTGGTCTAAGGTAACATTGGACCTGTTTGCCTtgcgtgtgtttttatttaattagtttctttaatagATATTTAAGTTATAGTTATTTAAACTCTCCACTGAACCCAAGACTGGAGGAACTAATCCAGATAGCGCTCTGGGTGAC

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04111 Cell cycle - yeast

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU84328 lncRNA upstream 9643 42473658 ~ 42473885 (+) True G67528
TU84321 lncRNA upstream 79262 42403821 ~ 42404266 (+) True G67521
TU84316 lncRNA upstream 87532 42395725 ~ 42395996 (+) True G67519
TU84275 lncRNA upstream 333561 42149559 ~ 42149967 (+) True G67479
TU84197 lncRNA upstream 498497 41984611 ~ 41985031 (+) True G67405
TU84336 lncRNA downstream 101900 42585827 ~ 42586035 (+) True G67536
TU84366 lncRNA downstream 408101 42892028 ~ 42892439 (+) True G67564
AMCG00021029 mRNA upstream 19345 42423343 ~ 42464183 (+) False AMCG00021029
AMCG00021024 mRNA upstream 358527 42122817 ~ 42125001 (+) True AMCG00021024
AMCG00021025 mRNA upstream 391872 42062717 ~ 42091656 (+) True AMCG00021025
AMCG00021023 mRNA upstream 468374 41983383 ~ 42015154 (+) True AMCG00021023
AMCG00021019 mRNA upstream 548783 41894833 ~ 41934745 (+) True AMCG00021019
AMCG00021034 mRNA downstream 141457 42625384 ~ 42919615 (+) True AMCG00021034
TU84320 other upstream 17642 42426111 ~ 42465886 (+) True AMCG00021029
TU84255 other upstream 429853 42052930 ~ 42053675 (+) True G67459
TU84094 other upstream 881415 41598223 ~ 41602113 (+) True G67323
TU84041 other upstream 1430970 41051472 ~ 41052558 (+) True AMCG00021005
TU83857 other upstream 2161707 40321113 ~ 40321821 (+) True G67108

Expression Profile